| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5633 |
|---|
| Symbol | |
|---|
| ID | 8886848 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 5987081 |
|---|
| End bp | 5989315 |
|---|
| Gene Length | 2235 bp |
|---|
| Protein Length | 744 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | NB-ARC domain-containing protein |
|---|
| Protein accession | YP_003514356 |
|---|
| Protein GI | 291303078 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.345268 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0245797 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAACCGG ACGATCAGGA ACCGGAAGCC GAGGGCCGCG GCGACGCGAA GCCCGAACCG
GTGGTCCGCA ACGATTCCTC GGGGCCGGTG GGTGGCAACC TCTACCAGGG GCACACCATC
ACTGTCACCA ATGTGCACAC CGCCGTACGC GGTTTCGACG ACCTGCCCGA GATCCGTCCC
AGTGGACTGC CACAGGCGCC GGAGATATTC GTCAACCGAG TGGACAAAAT GGCCGAACTA
ACCGCGTTGG TCACCAAGCC GAGGAAGTCG GGCGCGGCGC TTGTCGCGAT CGGTGGCCTC
GGCGGGGTGG GGAAGTCCGC TCTTGTCGCG CGGTGGGGTA ACCAGGTCGC CGGGGAGCTT
TTCCCGGACG GCACGATGCA CGTCAACCTG GGCGCCCACC GAGCCAACGG CGGCGTGGGA
ATGAACGCCG CGTTCGCGCA GCTCCTGGGC CAGTGCGGTT GCGAGGACTG GCAACTGGCG
AAGGACCTGC CCGGACGGCG AGAACAACTG CGCGCCCGGC TCAGGGGTAA GCGGGTGCTT
CTGGTCGCCG ATGACGTCAA TACCGACGCG GAAGTGGCGC AGTTGCGGCC CGAGTATGTC
GGCAGCGCCC TGATCATCAC CGGCCACGGC GGCGGCGAGT ATGCCATGGA CCAGGAACAC
CTGTCGGTGG AACCGTTGGA CGACGCCTCG GCATTCGAGC TGGTGTCCAT ATTGATCGGT
TCCGGGGAAG CGGAGGCGGA ACGGGCCGAG GTCACCGAAC TCGTCCGCCT GTGCGGCGGA
GTGCCCAAGG TGATCGGTAT CGCGGTGGGC CCGGTTCGCC GCCACGACAG CATCCGGATC
GCCGACGTGT TGGCGGGGCT GCGAACCGAA ATCGACGGCG CCGAGGGTCC CGTCGATCAG
GACTCCATTC TGGGCATGGT CGCCGATCGG GCCTACCATT CACTGACACC GGAAGCCGCC
CGCCTGTACC GCGCCCTGAG TTGGCATCCG GAAGGCGACG TCTCGAAGCA CGCGATCCTC
GCCCTGGCGC AGCATCCAAG CGGCACGGGT GAGCCGCCGC TGATCGACCT TCTCGAGCAC
CATCTGCTGG AACCGCTCCA GACAGACCGG TACAAGCTGT CGTATCTCGT GCGCGCGCAC
GCTCGTCGGC ACGCCATCAG TGTGGACGGT CCACGAGCGG AGCGTGAAAC GCTGAAGGTA
CTGGCCAGCT GGTACGCGGC ATGGGCTCAC AGCGCCGACA AGACCATGAT CCCGAACCGC
ACCCGGGTGT TCGCCACCGA ACCGTCACGG CGACCGCCGT TCACCACGGG CGACGACAAG
GACGAGAACA AGCGCGACGC CCGCGACTGG TTCGAAGCCG AACGGTACAA CCTGCTCGCC
ATCCAGCGCC GTTGCTTCGA TGAGGGCTGG TACGACCTGG TGATGCGGCT CGGCGAGTCG
ATGTGGGTCA TGTACATCGG CGGCCGGTAC CTGGAGGACT GGCTCGATTC CAGCAGGCTC
GCCGTCACCG CCGCCGTCGA TTCGGGGCAC CCGGCCGCGG AAGTACGGTT TCGTGCCTTC
CTCGCGCGGG CACTGATGGA GAACGCCGCG ATCGCGACCG AGCCGGATCG GCTGTTCGAC
GAGGCCGCGC GTGAACTGAC GCGAGCCCGG GAACTGCCGA TGGCGGACGG TATCGGCCCG
GACCTGCGCG CCTCAGCGAT CGAGTTCACC GGACGCTGGT ACAGCTACAA GGGACAGTAC
CGGGAGGCAA TCGACTGCTA CCGGCAGGCA ATACCGTTGT TCGCGTCGCA AGCTGAGCGA
ACCGATCTCC CCGACGAAAG TCGTCGCGCG AGCCAGCGCG GCGTCACGCT CCAGCTCCAC
TTCATCGGCC GGTGCCTGCT GAAACTCGGT GACCTGACCG GAGCCGCGGA ACACTTGCGG
CAAGCCGAAT CCCGCATGGT CGGTACCGAC CACGACCGCG ACGTAGCCAC GATCCGCACC
GACCTCGGCG AGGCGTTGCG CCGACTGGGC AGACTGGACG AAGCCTTCGC CGTCGTCACC
GCCGCGGTGG ACGTGTTGGC GTACAAGAAG TGGTACCGCA TCGAAATCAG CGCCCTGCGG
CAGTTGGCGC TCGTAGCCGA AGCGCGCGGC GACACCGAAC TGGAACGCAC GTGTCTTGAG
CGACTGCGTG ACCTGTACAC GGCGACCCAC GACACGGAAC TATCCGCTGT GGAGGAAAGG
CTGAGGCGGC TGTGA
|
|---|
| Protein sequence | MEPDDQEPEA EGRGDAKPEP VVRNDSSGPV GGNLYQGHTI TVTNVHTAVR GFDDLPEIRP
SGLPQAPEIF VNRVDKMAEL TALVTKPRKS GAALVAIGGL GGVGKSALVA RWGNQVAGEL
FPDGTMHVNL GAHRANGGVG MNAAFAQLLG QCGCEDWQLA KDLPGRREQL RARLRGKRVL
LVADDVNTDA EVAQLRPEYV GSALIITGHG GGEYAMDQEH LSVEPLDDAS AFELVSILIG
SGEAEAERAE VTELVRLCGG VPKVIGIAVG PVRRHDSIRI ADVLAGLRTE IDGAEGPVDQ
DSILGMVADR AYHSLTPEAA RLYRALSWHP EGDVSKHAIL ALAQHPSGTG EPPLIDLLEH
HLLEPLQTDR YKLSYLVRAH ARRHAISVDG PRAERETLKV LASWYAAWAH SADKTMIPNR
TRVFATEPSR RPPFTTGDDK DENKRDARDW FEAERYNLLA IQRRCFDEGW YDLVMRLGES
MWVMYIGGRY LEDWLDSSRL AVTAAVDSGH PAAEVRFRAF LARALMENAA IATEPDRLFD
EAARELTRAR ELPMADGIGP DLRASAIEFT GRWYSYKGQY REAIDCYRQA IPLFASQAER
TDLPDESRRA SQRGVTLQLH FIGRCLLKLG DLTGAAEHLR QAESRMVGTD HDRDVATIRT
DLGEALRRLG RLDEAFAVVT AAVDVLAYKK WYRIEISALR QLALVAEARG DTELERTCLE
RLRDLYTATH DTELSAVEER LRRL
|
|---|
| |