Gene Snas_5626 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5626 
Symbol 
ID8886841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5981068 
End bp5981880 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content69% 
IMG OID 
ProductArginase/agmatinase/formimino glutamase 
Protein accessionYP_003514349 
Protein GI291303071 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.366232 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00341242 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACTGATC GCAACACCAA CAGCGCCTGG GATCTGATCG TCACGCCCTG GCATCTCGAC 
GAGCACATCC CGGCCTTTCC GATCCCCGAC ACCGCGACCC CGGTCGCTCG CCCGGCTCTC
CCCGCCGGTC CCGTTCCCGT CCGCATGAAC CTGCTGCATG AGGCCACCCT CGACGTGGTG
ACGCGGACCG ACAGGCCCCT GGTGTTGTCC GGCGACTGCC CCACCGCCAG GGCGGTGCTG
GCCGGGATGC AGCGCCGTCA CCAGGACCTG GCCGTGCTGT GGCTGGACGC CCACGGCGAC
TTCAACACCC CCGCCATATC GACCAGCGGC TATCTCGGCG GTATGGCTCT GGCCATGCTG
ACCGGCCGGA CACCCGGGCT GTTCGACGAC ACGCTCGGAC TTCGGCCAGT CGACGAGGCC
AATGTCGTGC TCGCTGACGC CAGGGATCTC GATCCCGCCG AGCACGACGC CCTGTCCACG
AGCCAGGTCC ACCGTGTACC CGCCGACCCG GCCGCGATCA CCACCGCCCT CGAAAGGCTC
GGCGGCACAC CGGTTTACGT CCACCTCGAC ATCGACGTCA TTGACGGCGC CCAGCTGCCC
GGCGCGCGCT TCCCCTCCGG CCCCGGCCCT TCCTTCGCCC AGATCGAGGA GTGCCTGACT
GCCGCCTGCG CCACCGCCGA CGTTGTAGCC GCCTACATTG CCTGCGCCTG GCTGCCCGAC
CACGTCAACG ACCAGACCAC ACGCGAAGCG ATCACCCGGC TCACAACAGC ACTCGGCGCC
AATCTGACAT GGCGCCAGCC GACAGACCGC TAA
 
Protein sequence
MTDRNTNSAW DLIVTPWHLD EHIPAFPIPD TATPVARPAL PAGPVPVRMN LLHEATLDVV 
TRTDRPLVLS GDCPTARAVL AGMQRRHQDL AVLWLDAHGD FNTPAISTSG YLGGMALAML
TGRTPGLFDD TLGLRPVDEA NVVLADARDL DPAEHDALST SQVHRVPADP AAITTALERL
GGTPVYVHLD IDVIDGAQLP GARFPSGPGP SFAQIEECLT AACATADVVA AYIACAWLPD
HVNDQTTREA ITRLTTALGA NLTWRQPTDR