Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5626 |
Symbol | |
ID | 8886841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 5981068 |
End bp | 5981880 |
Gene Length | 813 bp |
Protein Length | 270 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | Arginase/agmatinase/formimino glutamase |
Protein accession | YP_003514349 |
Protein GI | 291303071 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.366232 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00341242 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACTGATC GCAACACCAA CAGCGCCTGG GATCTGATCG TCACGCCCTG GCATCTCGAC GAGCACATCC CGGCCTTTCC GATCCCCGAC ACCGCGACCC CGGTCGCTCG CCCGGCTCTC CCCGCCGGTC CCGTTCCCGT CCGCATGAAC CTGCTGCATG AGGCCACCCT CGACGTGGTG ACGCGGACCG ACAGGCCCCT GGTGTTGTCC GGCGACTGCC CCACCGCCAG GGCGGTGCTG GCCGGGATGC AGCGCCGTCA CCAGGACCTG GCCGTGCTGT GGCTGGACGC CCACGGCGAC TTCAACACCC CCGCCATATC GACCAGCGGC TATCTCGGCG GTATGGCTCT GGCCATGCTG ACCGGCCGGA CACCCGGGCT GTTCGACGAC ACGCTCGGAC TTCGGCCAGT CGACGAGGCC AATGTCGTGC TCGCTGACGC CAGGGATCTC GATCCCGCCG AGCACGACGC CCTGTCCACG AGCCAGGTCC ACCGTGTACC CGCCGACCCG GCCGCGATCA CCACCGCCCT CGAAAGGCTC GGCGGCACAC CGGTTTACGT CCACCTCGAC ATCGACGTCA TTGACGGCGC CCAGCTGCCC GGCGCGCGCT TCCCCTCCGG CCCCGGCCCT TCCTTCGCCC AGATCGAGGA GTGCCTGACT GCCGCCTGCG CCACCGCCGA CGTTGTAGCC GCCTACATTG CCTGCGCCTG GCTGCCCGAC CACGTCAACG ACCAGACCAC ACGCGAAGCG ATCACCCGGC TCACAACAGC ACTCGGCGCC AATCTGACAT GGCGCCAGCC GACAGACCGC TAA
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Protein sequence | MTDRNTNSAW DLIVTPWHLD EHIPAFPIPD TATPVARPAL PAGPVPVRMN LLHEATLDVV TRTDRPLVLS GDCPTARAVL AGMQRRHQDL AVLWLDAHGD FNTPAISTSG YLGGMALAML TGRTPGLFDD TLGLRPVDEA NVVLADARDL DPAEHDALST SQVHRVPADP AAITTALERL GGTPVYVHLD IDVIDGAQLP GARFPSGPGP SFAQIEECLT AACATADVVA AYIACAWLPD HVNDQTTREA ITRLTTALGA NLTWRQPTDR
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