Gene Snas_5619 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5619 
Symbol 
ID8886834 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5974942 
End bp5975346 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content65% 
IMG OID 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003514342 
Protein GI291303064 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.966893 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00498521 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACACACA TGACGGACGA CGAGGTGCGC ACAGCGTGGT GTGAAACACT TCGGGTCGTC 
CACACCACGT CCTGCGAGCT TGAGAACGAA CTCCAAGCGC GCCATGACCT GGGGCTCAGT
GAGTTCGAGG TCCTCTGTCA GCTCGGTGGC GTATGCGGCA AGGGCGACGG CAAGGTCAAG
ATGAAGGACC TTGAGGCGAA GATGTATCTG AGCCAGAGTG CGCTATCTCG CACTGTGACC
CGGTTGGAGA AGGCGGGACT GGTGACCCGC GCGGTCTGTG ACTTCGACCG CCGCGCCATG
TTCCTGGAAC TCACCGACGA GGGCCGCGCG CGCTGGGAGG CCGCCGCGCC GACCCACCTG
GCGGTGCTGC GGGCCGCCCT GGACAAGGTG CCCGAACCCG CCTAG
 
Protein sequence
MTHMTDDEVR TAWCETLRVV HTTSCELENE LQARHDLGLS EFEVLCQLGG VCGKGDGKVK 
MKDLEAKMYL SQSALSRTVT RLEKAGLVTR AVCDFDRRAM FLELTDEGRA RWEAAAPTHL
AVLRAALDKV PEPA