Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5578 |
Symbol | |
ID | 8886793 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 5928002 |
End bp | 5929438 |
Gene Length | 1437 bp |
Protein Length | 478 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003514302 |
Protein GI | 291303024 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCCGCA AAGCTTCCCC ACCCCCGTCA CGGCGGTGGA CGGCGCTGGC GCTGATCGCA CTGGCGCAGT TCATGGTCAT CATGGACACC TCGATCATCG GCGTCGCACT GCCGAAGATG CAGAAGGAAC TCGGGTTCTC GCAGGAGAAC CTGTCGTGGG TGTTCAACGC CTACGTGGTG GTGTTCGGCG GTCTGCTGCT GTTGGGCGGC AGGCTGTCCG ACCTGTTCGG CGCCCGCAGG CTGTTCAGTC TCGGCTGGAT CGTGCTCGGC GCCGGATCCC TTGTGGCCGG TGTCGCCGGT GACGTGCCGA CCGAGCTCAT CGGTCGCGGG GTCCAGGGCG TCGGCGCGGC GCTCATCGCG CCCTCGGCGC TGACCCTGTT GATGATGCTG TTCGGCGCCA ACCCCAAGGA GCTGACCAAG GCCTTCGCCG TCTACGGGGC CGCGGCCCCG GCCGGCGGCA CCGCCGGGGT GTTCCTCGGC GGCCTGATCA CCGAGTACGC GTCCTGGCCG TGGGTCTTCT ACATCAACAT CCCGATCGCG ATCCTCGCCC TGGCCGCCGC CCCCGCGTTG CTGCCCGGTG GTGCCCTGGC ACCCCGCGGC TCCATCGACG TGGTCGGCGC GCTGACCGTC ACGCTGGGCC TGGGCGCGGC GGTGTTCGCC ATCGTCCGTG CCCCCGAGAT CGGCTGGGGC GACCCGGCTA CCTGGGGCGT GCTGCTGCTG GCGGCGGTGT TGCTGGTCGG GTTCCTGTTG TCGCAGGCCA GGAAGCGGCA GCCGCTGATG CCGCTGTCGA TCTTCCGGGC CGCGAACCTC GCCGCGGCGA ACCTGGCGCA GCTGCTGCTG GGCGCCGCCT GGATTCCGAT GTGGTTCTTC CTCAACCTGT ACCTGCAACA GGTTCTGGGT TACTCGGCGT TCCCCTCGGG TGCGGCGCTG CTGCCGATGA CCGTGTTGAT CATGGTCGGC ATGGTCGCGC TGGCCCCCCG GCTCATGGCC CGGTTCGGCG CCAAGGCGAT GATCGTCACC GGTCTGGTCC TGCTCGCGGG CGGGCTGTAC TGGATGTCGT TCATCCGTCC CGACGGGAAC TTCTGGGTCG ACGTCCTGCC CGCCTCGCTG CTGGCGGCGC TGGGCATGTC GCTGGCGTTC ATCCCGTCAC TGCAGACGGC GATCTCGGCG GCGAAACCGG AGGAGGGCGG CCTGGCCTCG GGCATCGTCA ACACCAGCTA CCAGATCGGC TCCGCGCTGG GGCTGGCCGT GGTCACGGCC GTGGCCGCCG GTTACGGCGC CGACCGGCTG GGCGACAAGG TCGCGCTCAC CGACGGCTTC TCGGTGGCGT TCATCGCCGC GGCACTCGTC GCGGCCGTGG CCGCCGTGCT GACGGTGGTC ACCGTCCGAA CCCGGAAAGC CGCGGAAACC GAAACCAAAG TAGACAGTGT GGTGTAA
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Protein sequence | MSRKASPPPS RRWTALALIA LAQFMVIMDT SIIGVALPKM QKELGFSQEN LSWVFNAYVV VFGGLLLLGG RLSDLFGARR LFSLGWIVLG AGSLVAGVAG DVPTELIGRG VQGVGAALIA PSALTLLMML FGANPKELTK AFAVYGAAAP AGGTAGVFLG GLITEYASWP WVFYINIPIA ILALAAAPAL LPGGALAPRG SIDVVGALTV TLGLGAAVFA IVRAPEIGWG DPATWGVLLL AAVLLVGFLL SQARKRQPLM PLSIFRAANL AAANLAQLLL GAAWIPMWFF LNLYLQQVLG YSAFPSGAAL LPMTVLIMVG MVALAPRLMA RFGAKAMIVT GLVLLAGGLY WMSFIRPDGN FWVDVLPASL LAALGMSLAF IPSLQTAISA AKPEEGGLAS GIVNTSYQIG SALGLAVVTA VAAGYGADRL GDKVALTDGF SVAFIAAALV AAVAAVLTVV TVRTRKAAET ETKVDSVV
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