| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5542 |
|---|
| Symbol | |
|---|
| ID | 8886756 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 5888832 |
|---|
| End bp | 5889416 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003514266 |
|---|
| Protein GI | 291302988 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.789571 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.111085 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACGA CGAGACGGGG CCGGCCGCGT TCCTTCGACC GGGATGCCGC GCTGGGGCGA
GCGCTGGATG CCTTTTGGCG CCACGGTTAC GAGGGCACGT CGATGGCCAC CCTGACCGAG
GCCATGGGGC TCAACCCGCC GAGCGTCTAC GCCGCCTTCG GCGGCAAGCG TGAGTTGTTC
GACGCGGTGG TCGCGCACTA CCAGGAGGAG AAGCGGGAGC TCATGGCCTC GGCGCTGTCC
GAGTCGGGGA GCGCTCGCGA GGCCGTGGCG CGGCTGCTGC GGGTGTTGGC CGACGACTAC
ACCGACAGGT CGCATCCTCC CGGCTGTCTG GTGATCTCGG CGGCGGTCAA CTGCTCCCCC
GCCGCGTCCG AGGTCGAGGC GAGCCTGCGG GCGCATCGGG AGGCGTCCAA GCGGGCCATC
GCCGAGCGGA TCGCCGTCGA CCATCCCGCG CGAGCCGAGG CCCTGGCGCT GTATGTGGCG
GCGGTGGTGC AGGGCATGTC GACGCAGGCC CGCGACGGCG CCACCCGCGA GCAGTTGCGC
GGGCTCGCCG ACACGGCGAT GCTGGCCTGG CCCGACGGCG ACTGA
|
|---|
| Protein sequence | MTTTRRGRPR SFDRDAALGR ALDAFWRHGY EGTSMATLTE AMGLNPPSVY AAFGGKRELF
DAVVAHYQEE KRELMASALS ESGSAREAVA RLLRVLADDY TDRSHPPGCL VISAAVNCSP
AASEVEASLR AHREASKRAI AERIAVDHPA RAEALALYVA AVVQGMSTQA RDGATREQLR
GLADTAMLAW PDGD
|
|---|
| |