Gene Snas_5469 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5469 
Symbol 
ID8886680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5801666 
End bp5802460 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514193 
Protein GI291302915 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.51215 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTGTACC TGAAGAATCG CGGCATGGAA ACCGTTGCCC CCGCGGTTCT GCTCGCCCTG 
TTCGCTGTCG CTCTCATCGC TGGGAGTGTT GACGCCATCG CCGGTGGCGG TGGGTTGTTG
ACGTTGCCCG CGTTGTTGTT GGCCCAGATT CCGCCGGTGC ACGCCATGGC GACCAATAAG
CTGCAGAGCA GTTTCGGGAC GTTCACTTCG GCGATGTCGA TGCGGCGCAA GGGGTTGGCG
GGGCCGGTGG ATATGCAGGC CCCGTTCTTG TTCGCGTTGG CGGGATCGGC GGTGGGGACC
GTGACGGTGC AGTTCATCGA TACCCGGGCG CTGACGGTGG TGGTGCCGGT GGTGCTGGCG
GGCATCGCGA TCTATTTCAT CGCGATGCCG AAACGGCCCG ATCGGGATGT GGAGCCCCGG
TTGGCGTTGG CGCCGTACAA CAGTCTGGTG GTTCCGGGGA TCGGTTTCTA TGACGGCGCT
TTCGGGCCGG GGACCGGGTC GTTCTTCACG GCGGCGGGAG TGTCGTTGCG GGGGCAGCGG
TTGGTTCCGG CTTCGGCGCA GGCCCGGATG TTGAACTTCG CCACCAACGT CGCCTCGTTG
GTGGTGTTCG CCATCGGGGG TAAGACGATG TGGCTGGTGG GTGGGATCAT GGCGGTGGGT
TCGATGTCGG GCGCCTACCT GGGGGCGTTG GCCGTGTCGC GGGGCGGCGC GCGGTTGATC
CGTCCGATCG TCGTGGTGAT GTGTCTGGGG ATGCTGGTTC AATACCTGTG GCGGCAGGGT
TGGCTTCCGT TCTGA
 
Protein sequence
MVYLKNRGME TVAPAVLLAL FAVALIAGSV DAIAGGGGLL TLPALLLAQI PPVHAMATNK 
LQSSFGTFTS AMSMRRKGLA GPVDMQAPFL FALAGSAVGT VTVQFIDTRA LTVVVPVVLA
GIAIYFIAMP KRPDRDVEPR LALAPYNSLV VPGIGFYDGA FGPGTGSFFT AAGVSLRGQR
LVPASAQARM LNFATNVASL VVFAIGGKTM WLVGGIMAVG SMSGAYLGAL AVSRGGARLI
RPIVVVMCLG MLVQYLWRQG WLPF