Gene Snas_5381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5381 
Symbol 
ID8886590 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5714568 
End bp5715656 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content68% 
IMG OID 
ProductFAD-dependent pyridine nucleotide-disulfide oxidoreductase 
Protein accessionYP_003514106 
Protein GI291302828 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGCTC GAGTGAACAC CACTTCCCTT CCCGTTGTCA TCGTCGGAGC CGGGCAATCC 
GGCTTGGCCG CCGCTCACGC CGTCCGCGAC ACCGGACTCA CGCCGCTGGT CCTGGAGGCC
GGCGACCGTG CCGCCGGATC GTGGCCCCAC TACTACGACA GTCTCAAAGC CTTCTCCCCC
AACCGGTTCA ACAACCTCGC CGGCATCACC TTCGGCGGCG AACCCGACGC CTACCCCACC
CGCGACGAGG TCGCGGCCTA CCTGGAACGC TTCACCGAAA GCCTGAGCGT GGAGATCCGC
ACTGGCACCC GGGTCACCGC CGTGTCGAGC GAGTCCGGGC GCTACCTCGT GGCCACCGCC
AACGGGGACA CCGTGGAGGC GTCGGGGCTC GTGGCCGCCA CCGGTTCCTT CGCCAACCCA
CATTTCCCCG ACTTCGACGG GACCGATCGC TTCGGCGGGG AGCTGTTGCA CGTCGCCGAC
TACCGCGAAC CCAGCCCCTA CAAGAGGAAG CGCGTCATCG TGGTGGGTGC GGGCGACTCG
GCCGTCCAGG TCGCCGTCGA ACTCGCCCAT GTCGCGACCG TGACGCTGGC CAGCCACCAG
ATGCCCACGC TGGTCCCGCA GCTGTTCAAC GGCCGCGACG TCCACTACCT GCTCACCGAC
CGCTTCGACG AGCTGCCGCC CGCGTGGCTG GCGCGGCTGC TGACCGGCAA GATGGTCATG
GACACCGGCG GATACCAAGA CGCCTTCGAC ACCGGACTGC TGGACCGCCG CGACATGTTC
ACCGGCCTCA CCGAAACCGG GGTGGTGTGG CCCGACGGCG GTCACGACCC GGTCGACGCG
ATCATCCTGG CCACCGGATA CCGGCCCAGC CTCGGCTATC TGAAGTCCCT GGGTGCCCTG
GATGATCACG GCATGCCGCT GCACTCCCAG GGCGTGTCAC TGACCCATCC GGGCCTGGTC
TTTCTCGGCG TCGAATACCA GCGCAACTTC GCCTCCAACA CCCTGCGCGG CGTCGCTGCC
GACGCCGCCC ACGTCACCCC GGCCCTGATC GCCTACGCGG CCGGGGCACA CCTGCCCTTC
ACCCAATAA
 
Protein sequence
MIARVNTTSL PVVIVGAGQS GLAAAHAVRD TGLTPLVLEA GDRAAGSWPH YYDSLKAFSP 
NRFNNLAGIT FGGEPDAYPT RDEVAAYLER FTESLSVEIR TGTRVTAVSS ESGRYLVATA
NGDTVEASGL VAATGSFANP HFPDFDGTDR FGGELLHVAD YREPSPYKRK RVIVVGAGDS
AVQVAVELAH VATVTLASHQ MPTLVPQLFN GRDVHYLLTD RFDELPPAWL ARLLTGKMVM
DTGGYQDAFD TGLLDRRDMF TGLTETGVVW PDGGHDPVDA IILATGYRPS LGYLKSLGAL
DDHGMPLHSQ GVSLTHPGLV FLGVEYQRNF ASNTLRGVAA DAAHVTPALI AYAAGAHLPF
TQ