| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5360 |
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| Symbol | |
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| ID | 8886569 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 5695664 |
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| End bp | 5698405 |
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| Gene Length | 2742 bp |
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| Protein Length | 913 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003514086 |
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| Protein GI | 291302808 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.265987 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGTTC GGGTGCTTGG AACCGTTCAA GTCATCTCGA ACGGGCAACC GATTCTGCGA
GCGAGGCGGC GAGAACGACT GCTGCTGGGG CTGTTGGCAT TGGAGGCCAA CCGGTCGATC
ACGACCTCGC GTCTTGAGCA GTTGCTGTGG GACGGCGACG CGCCGAAGAA TCCACGCCAA
GTGATTCGGG TCTACATATC GCGGCTGCGG ACGCAATTGG AGGCCGCCGA CTCGTCGCTG
GTCGAGTTGG CCCATGAGGG AACCGGGTAC GTGTTGCACA TTGCCCCCGA GCGTGTCGAC
GCGCTCCGTT TCGAAGCGGA GGTGGCCGCC GCGCGTGCGG TGCCCGACCC CCACGAACGC
GGCCGATGCC TCGCCGCCGC CCTCGCGCTG TGGCGCGGCC CCCTGCTGGA CGGCGCGGCG
GACGAGCTGC TGCGCGACCG GATCGGGCAA CGACTCCACG AACAGCGACT GGCCGCCGAG
GAGCTCCGCG TGGAGGCGGA ACTAGAAGCC GGACACCACG AGGCACTGCT GCCCGAATTG
GCCGAGCTGA CCGTCCGGTA CCCGTTGCGC GAGAAGCTCA TCGCCGCCCG CATGACGGCA
CTGCACCGAT CCCACCGCAC CTCCGAGGCA CTGGCGCTCT ACCGCACCGC CACCACGGAG
CACCGCGAGC AGTCGGGACT CGACTTCAGC GACGCCCTCA AAGCCCTGCA CGTGGCGATA
CTCCGAGCCG ACGAACTCAC GAGCGACGAC CCGGAAGCGC CCGGCGCCTC CACACCGGTT
CCCGCCCAAC TCCCATCCGA CCTCGCCCGC TACGTCGGCC GCCAACCCGA AATCCACGCG
CTCACCGCCG CGGTCTCCGG CACCACCCGA GGCCGCGCGA GGGTGTTCGC CGTCGACGGC
ATGGCCGGTG TGGGCAAGTC GGCCCTGGTG ATCCACGCCG CCCACCGCGT CGCCGACCGG
TTCCCCGACG GCCAGCTCTA CGTCAACCTG CACGGATTCA CCCACGGTTC GCAGCCGGTC
TCGCCCGTCG ACGTCCTCGA TCGCATGCTG CGGGCGCTAG GCATACCGGC CGACAAGATC
CCCCGCCTCA CCGACGACCG CGCCGCCGTA TTCCGCAGCC TGCTGGCCAA CCGGAAACTG
TTGATCATTC TGGACAACGC CGCCAGCGAA GACCAGGTGG AACCGCTGCT GCCCGCCGCC
GAAGGCTGCC TGGTGTTCAT CACCAGCCGC ATCCGGCTGT CGGGTCTGGA CGATATCCAC
CTCCTGTCGC TCTCTCCGCT GTCCATTGAA GATTCCATGG AACTGTTCCG GCAGATCGCC
GGTCCCGACC GGATCGGCGG CGACACCGAG ACGCTCGCCG CGATCGTGGG CATCTGCGGA
AACCTCCCCT TGGCGGTGCG CATCGCCGCC GCCCGCCTGC GAGACCAACC CCAGTGGACC
ATCAGCTCGC TGCTGGAACG GCTCCGGAAC GGCGACGCGC CACTGTCCGA ACTGGCCATC
GGCCACCGGG GAGTCGCCAA GGCCCTGGAA CTGTCCTACC GCCATCTGGA TGCCCCGGCC
CAGCGGATGT TCCGGCTGCT GGGGCTGGCA CCGGCCATGC CGGTGGACGC CCAGGCAGCG
GCTGCCCTGG CCGACACGAC GACCAGATCC GCCGAGACGG TCCTGTCCAC CCTGACCTCC
GCGCGAATGC TCGATTCCCA GGCCACGGAC CGCTACCAGT TCCATGACCT CACCAAGCAC
TACGCCGCCG ACAAGGCCGA CCGCGACGAA ACCGCCGAGT CACGACGGGA AGCCCTCAAG
CGGCTGCTCG ACCACTACCT GAACCTGGTC ATGCTAGCCG CCCACCGGCT CGAACCAGCG
CAGATCACCC TCAAAGGCGA CGCCAATCCG AACGCGATAC CCGACCACGC GGCGGCACTG
TCCTGGCTGG ACGACAGACG GCACCAACTG AAGGCCGCCG TCATCGCGGG AAACACCGAG
GGCTTCCACG GGCAGGTCTG GGATCTGTGT GCGCGGATGA CCGGGTACTA CAGGCTTCGC
GGTCACTACG AGGACTGGCT GACCACGCTC CAGCGTGGAC TGTCTTCGGC CACGGCCCTC
GACGATGACC AGGCGCGGGC CTACATGCTG GTTCGGCTGA TACTCCCGTA CCAGGCCACG
GGCGACACCG CTCGTGCCTT CAGCAATGCC GAAGAGGCCG CCAGTCTGTT CGAAAGGCAC
GGGAACGACA TCATGCAGGC GGCGGCCCTC AACAATCTCG GGTGGCTGGT CGTCGAGTCC
GCCGAGCGCA CCAACACCGA CGCCATCGAC TCAGCCCGGC GACACCTGGA AAAGGCCCTC
GAGTTGTGCA CCGGACTGGC CAATGCCAAC GGTCAGGTGA AGGTCCTGGT GAACCTCGGC
GATCTGTGTC GCATGCGGGA CCAGTGCGAC GAGGCGCTGC GACACTACGA TCGCGCCTTG
TCCCTGGCCC GGGAAACCGG ACAAGCGGAC GACCAGAGTG CCGCGCTCTA CGGCATCGGC
CTCACACACA TCGAACAGCG CGAATACTCC TCGGCGATCG ATCCGCTGAC CGAAGCCCTG
AACCTGTCCC GCCAGGCCGG AGCCCTGGCG CGCATACCCG GTTGCCTCGA GAATCTCGGC
AACGCCCACA AAGAACTCGG GCAGCTCGAA CAGGCGTCGA GGTATCACCA GGAACTGGAA
GACCTGCTCG CCGGTGACGA CAGTGCCCTC ACCTGCCCGT GA
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| Protein sequence | MEVRVLGTVQ VISNGQPILR ARRRERLLLG LLALEANRSI TTSRLEQLLW DGDAPKNPRQ
VIRVYISRLR TQLEAADSSL VELAHEGTGY VLHIAPERVD ALRFEAEVAA ARAVPDPHER
GRCLAAALAL WRGPLLDGAA DELLRDRIGQ RLHEQRLAAE ELRVEAELEA GHHEALLPEL
AELTVRYPLR EKLIAARMTA LHRSHRTSEA LALYRTATTE HREQSGLDFS DALKALHVAI
LRADELTSDD PEAPGASTPV PAQLPSDLAR YVGRQPEIHA LTAAVSGTTR GRARVFAVDG
MAGVGKSALV IHAAHRVADR FPDGQLYVNL HGFTHGSQPV SPVDVLDRML RALGIPADKI
PRLTDDRAAV FRSLLANRKL LIILDNAASE DQVEPLLPAA EGCLVFITSR IRLSGLDDIH
LLSLSPLSIE DSMELFRQIA GPDRIGGDTE TLAAIVGICG NLPLAVRIAA ARLRDQPQWT
ISSLLERLRN GDAPLSELAI GHRGVAKALE LSYRHLDAPA QRMFRLLGLA PAMPVDAQAA
AALADTTTRS AETVLSTLTS ARMLDSQATD RYQFHDLTKH YAADKADRDE TAESRREALK
RLLDHYLNLV MLAAHRLEPA QITLKGDANP NAIPDHAAAL SWLDDRRHQL KAAVIAGNTE
GFHGQVWDLC ARMTGYYRLR GHYEDWLTTL QRGLSSATAL DDDQARAYML VRLILPYQAT
GDTARAFSNA EEAASLFERH GNDIMQAAAL NNLGWLVVES AERTNTDAID SARRHLEKAL
ELCTGLANAN GQVKVLVNLG DLCRMRDQCD EALRHYDRAL SLARETGQAD DQSAALYGIG
LTHIEQREYS SAIDPLTEAL NLSRQAGALA RIPGCLENLG NAHKELGQLE QASRYHQELE
DLLAGDDSAL TCP
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