| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5334 |
|---|
| Symbol | |
|---|
| ID | 8886543 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 5663245 |
|---|
| End bp | 5664102 |
|---|
| Gene Length | 858 bp |
|---|
| Protein Length | 285 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | ABC transporter related protein |
|---|
| Protein accession | YP_003514061 |
|---|
| Protein GI | 291302783 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAATCCG CATCGGACAC ACCCCGGCTG GCGACCGACG GCCTGCGGCT GGCCTACCAG
CGGCGGATCG TCATCGACGA CCTCGACCTG GAAGTGCCAC AGGGGAAGAT CACCGTCATC
GTGGGCCCCA ACGCCTGCGG CAAGTCGACG CTGCTGCACG GGATGGCCCG GCTGCACCCG
CCCGGCGCCG GCAAGGTGAT CTTGGACGGA CGGTCCATCC ACAGTACTCC GACGCGGCAG
GTGGCCCGCA AACTCGGGCT GTTGCCGCAG TCGCCGCAGG CACCCGAGGG ACTGACCGTC
GTCGACCTGG TCGGCCGGGG CCGCGCTCCG CACCAGTCCT GGTGGCGACA GTGGTCGGCG
GCCGACGAAC AGGCGGTGGA CGAGGCGCTG CGGGTCACCG ACATGACCGA CCTGGCGCAG
CGTCCGGTCG ACGAACTGTC CGGCGGTCAA CGGCAGCGCG CCTGGATCGC GATGGCGGTG
GCGCAGCAGA CGCCGATCAT GCTGCTGGAC GAACCCACCA CGTTCCTGGA CCTGGCGCAC
CAGATCGACG TCCTGGACCT GATCTTCGAG CTCAACCGGA CCGACGGGCG CACCATCGTC
ATGGTGCTGC ACGACCTCAA CCAGGCCAGC CGCTACGCCG ACCACATGAT CGTCATGAAG
GCCGGACTGG TCATGGCCGC CGGGCAACCG TCCGAAGTGA TCTCGGCGGA GCTGGTGGAG
GAGACCTTCG GGGTGCCGTG CGAGATCACC GTCGACCCGG TCAGCGACAC GCCGCTGGTG
ATCCCGGCGG GGCGGCATCA CCGTGCAAGC CAACCGATCG CTGACTTAAC GCGGCGCCGA
GCGCCCGCAG CAGCGTGA
|
|---|
| Protein sequence | MKSASDTPRL ATDGLRLAYQ RRIVIDDLDL EVPQGKITVI VGPNACGKST LLHGMARLHP
PGAGKVILDG RSIHSTPTRQ VARKLGLLPQ SPQAPEGLTV VDLVGRGRAP HQSWWRQWSA
ADEQAVDEAL RVTDMTDLAQ RPVDELSGGQ RQRAWIAMAV AQQTPIMLLD EPTTFLDLAH
QIDVLDLIFE LNRTDGRTIV MVLHDLNQAS RYADHMIVMK AGLVMAAGQP SEVISAELVE
ETFGVPCEIT VDPVSDTPLV IPAGRHHRAS QPIADLTRRR APAAA
|
|---|
| |