Gene Snas_5312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5312 
Symbol 
ID8886521 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5642832 
End bp5643797 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514039 
Protein GI291302761 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGACG AGAAGATGTC CGAGTTCACC GACGAGGAAC TCAACAAGAA GGTCAAGGAA 
CTACAGGACG CCGTCATCGA GAAGGTCAGG ACGGAGGCGG AGACCCCGGC CGTGTCCGGC
GGCTATCCGG GCTCCAACGC CTACCGGCCG GAACTCGACC GGGTCCCCAG CCGCGAGGAG
ATCCTGGAAC GGATCTCGTG GCTGCGGGAG ATGATCGACG ACATCCTCAA ACCGAAGCCC
AGCGACTTCG ACCCGCTCAT CGAGAAGACC GAGAAGCTGC GGGACCTGTT CGGCGTCGAG
AGCCACCAGC CCGGCGGCGA CTCCCGGCTG CGCAACATCG ACACGTCCAA GAACGCCATC
CAGCAGTGGG ACGGCGCCTT CGCCGACAAC CTGGCCGAGA AGTACTTCGC CCCGCTGGAG
GACGTGCGCG GCAACCACGG CCGGATGGCG AAGGTGCTCA ACGAGAACGC CGTCGCGATG
AAGGCCACCT ACGTGCACGC GCGCGGCCAG GCGAAGCGCA CCCTCGACGA CGGGGTGAAG
GCCATCGAGG CGATCGTCGA CAGCAAGGGC TCGGATCTGA AGATCCTGCT GGCCATCCTC
ACCGGGGCCA CGAGCCTGAT CACGCCGCTG TTGCCCAGCA AGACGGCGGT GCAGTTGGGG
TCGGCGGGGC TGTCGACGCT GCTGTCCAAC CTGGGGGAAG CCGGACCCGA AGAGCAGGAA
GAGGTTCCGC TCGGCGCCGA CACTCCCGAG GGCGTCATGG ACAACGTCAA GGAGGCGCTG
GAGAAGGTCA AGACGAAACG CGGCGAGGAC GAGGACAGCA TCATCAAGGC CGTCAACGAC
AGCGAGAAGG CGATCTACGA GCGCATGACG AAGTCCACGC ACCAGACCGA GGACGACCCG
ATCTACGCGC CCAGACCAAC CATCATGGAC AGCTCCAAAC CCAGTGAGGG CCTGACGAAG
GACTGA
 
Protein sequence
MADEKMSEFT DEELNKKVKE LQDAVIEKVR TEAETPAVSG GYPGSNAYRP ELDRVPSREE 
ILERISWLRE MIDDILKPKP SDFDPLIEKT EKLRDLFGVE SHQPGGDSRL RNIDTSKNAI
QQWDGAFADN LAEKYFAPLE DVRGNHGRMA KVLNENAVAM KATYVHARGQ AKRTLDDGVK
AIEAIVDSKG SDLKILLAIL TGATSLITPL LPSKTAVQLG SAGLSTLLSN LGEAGPEEQE
EVPLGADTPE GVMDNVKEAL EKVKTKRGED EDSIIKAVND SEKAIYERMT KSTHQTEDDP
IYAPRPTIMD SSKPSEGLTK D