| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5294 |
|---|
| Symbol | |
|---|
| ID | 8886503 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 5621590 |
|---|
| End bp | 5622174 |
|---|
| Gene Length | 585 bp |
|---|
| Protein Length | 194 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, XRE family |
|---|
| Protein accession | YP_003514021 |
|---|
| Protein GI | 291302743 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGGTG TGGAGGAACT GGACGAGGTA CTGACCGCCG TCGGCCCCCG GCTGCGGGAG
CTGCGGCGGC AGCGCAATGT GACGTTGGCC CGGCTCGCCG AGGCGACCGG CATCTCGGAG
AGCACGCTGT CGCGGTTGGA GAGCGGGGCG CGGCGGCCGA ACCTGGAGTT GTTGCTGCCG
TTGGCGAAGG TGTACGGGGT GCCGTTGGAC GAGTTGGTCG GCGCGCCGAC GACGGGTGAT
CCGCGGGTGC ATCTGCGGCC GGTGCATCGG GGTGGGATGA CGTTCATCCC GTTGACGCGC
CGGGCCGGGG GCATCCAGTC GTACAAGATG GTCATTCCCG GTGACACCTC GGGCCGGGAG
CCGGATCTGA AGACACACGA GGGCTACGAG TGGATGTATG TCCTCAACGG ACGGTTGCGG
TTGTTGTTGG GCGACAAGGA TCTGGTGCTC AATCCGGGCG AGGTGGCTGA GTTCGACACC
CATGTGCCGC ACTGGCTGGG CGCCGCCGAG GACGCGCCGG TGGAGCTGCT GATCCTGTTC
GGACAGCAGG GAGAGCGGGC GCACCTGCGC GCCCGCTCCC GCTGA
|
|---|
| Protein sequence | MVGVEELDEV LTAVGPRLRE LRRQRNVTLA RLAEATGISE STLSRLESGA RRPNLELLLP
LAKVYGVPLD ELVGAPTTGD PRVHLRPVHR GGMTFIPLTR RAGGIQSYKM VIPGDTSGRE
PDLKTHEGYE WMYVLNGRLR LLLGDKDLVL NPGEVAEFDT HVPHWLGAAE DAPVELLILF
GQQGERAHLR ARSR
|
|---|
| |