Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5255 |
Symbol | |
ID | 8886464 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 5581976 |
End bp | 5582704 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | two component transcriptional regulator, winged helix family |
Protein accession | YP_003513982 |
Protein GI | 291302704 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0134474 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCAGCA CCGGACCCAA GGCTTTGCGA CGCCCGGACG GCAGCCCGAT CCGGGTCCTC GTCGTGGACG ACGAGGCGCC GCTGGCGGAG CTGCTGTCGA TGGCGGTGCG CTACGAGGGC TGGCAGGCGT ACACCGCCGG GGACGGCACC GCCGCGCTGA AACTGGCCCG CGAACACCGT CCCGACGCGG TGATCCTGGA CATCATGCTG CCCGACATGG ACGGACTGTC GGTCCTGGAC CGGCTGCACG CCGACGCCCC GGAGACGCCG GTGCTGTTCC TGACCGCGAA GGACGCCGTC GAGGACCGGG TGCGAGGCCT GACCGCCGGT GGCGACGACT ACGTGACCAA GCCGTTCAGC CTGGAGGAGG TGCTGGCCCG GCTGCGCAAC CTGCTGCGCC GTTCGGGCGC GGCGCGCGCG AACCGGGCCT CGGCGCTGAC CGTCGGCGAC CTGACGCTCA ATGAGGACAC CCACGAGGTG AGCCGGGCCG GTGAGGACAT CCCGCTGACC GCGACCGAGT TCGAGCTGCT GCGGTACCTG ATGCGCAACC CCCGGCGGGT GCTGAGCAAG GCGCAGATCC TCGACCGGGT CTGGAACTAC GACTTCGGGG GACAGGCCAA TGTGGTGGAA CTGTACATCT CGTATCTGCG GCGCAAGATC GACGCGGGAC GACCGCCGAT GATCCACACC CGACGCGGTG CGGGGTACAT CCTCAAGCCG GGGGAGTGA
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Protein sequence | MTSTGPKALR RPDGSPIRVL VVDDEAPLAE LLSMAVRYEG WQAYTAGDGT AALKLAREHR PDAVILDIML PDMDGLSVLD RLHADAPETP VLFLTAKDAV EDRVRGLTAG GDDYVTKPFS LEEVLARLRN LLRRSGAARA NRASALTVGD LTLNEDTHEV SRAGEDIPLT ATEFELLRYL MRNPRRVLSK AQILDRVWNY DFGGQANVVE LYISYLRRKI DAGRPPMIHT RRGAGYILKP GE
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