| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5254 |
|---|
| Symbol | |
|---|
| ID | 8886463 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 5580333 |
|---|
| End bp | 5581970 |
|---|
| Gene Length | 1638 bp |
|---|
| Protein Length | 545 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | histidine kinase |
|---|
| Protein accession | YP_003513981 |
|---|
| Protein GI | 291302703 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.118583 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGACGTC CATGGTCGCT GCGCGCCCGG CTGGTGGCCG CCACCATCGG GCTGCTGGCG
GTGGTCAGCG CGGTCATCGC GACCGTCACC ACGATCGCGT TGTCGTCCTA TCTGTACGAC
CAGCTGGACC ACCAGCTGGC GGCCACGGCC GCGCGCTCGG CGGGGCCGGG GGCACCCACC
GACGGGGTGT CGTTCCTGGC CCAGCCGGGA CAGCCGATCG GCACGATCGG CGGGCTGGTC
GACGCCAACG GCGAGATCAC CGACGCGGCG GTGAGCCGGG AACCGGGCGG GCCGGGACCG
GCGGACCCCG CCGATCGGCT GACCACACTG GACGAGGACC AGATCGCGGC GCTGGAGAAG
GTCGAGGGGA GCGCGAAGCC AAGCACCGTC GAGGTTCCCG GGCTCGGGGA GTACCGGGTG
GTCACGCTCG ACTCGCCACA CGGAGCGTCG GTCCTGGTGG GACTTCCGAC AGCGCAGGTG
GCGGGCACGG TGGACACCCT CATCGTGGTG GAGTCGCTGG TGGCCGGGAC GGGCCTGTTG
GCGGCGGGCA TCGCCGCGGC GGTGGCGGTG CGGTTGGCGC TGCGGCCGCT GCGCCGGGTG
GCGGCGACCG CGAGCCGGGT GTCGGAGCTG CCGCTGTCCA GCGGCGAGGT GAGCCTGACC
GAACGGGTTC CCGACGCCGA TCCGCGCACC GAGGTGGGCC AGGTCGGCAC GGCGCTCAAC
CGGCTGCTGG GCCACGTCGG CGCGGCGCTG AAGGCCCGTC ACGACAGTGA GACCCGGGTC
CGTCGCTTCG TCGCCGACGC CAGCCACGAA CTGCGCACCC CGTTGGCCTC GATCCGGGGC
TACGCCGAGC TGACCCGCCG AGGCCACGAG TCCATCGGCC CGGACACCCG CCACGCTCTG
GGCCGCATCG AGTCCGAGTC GACCCGTATG ACGGGCCTGG TGGAGGACCT GCTCCTGTTG
GCGCGCCTGG ATTCGGGGCG TCCGCTGGCC ATGACCGACG TCGACCTCTC GGCGTTGCTC
GTGGACACCT TCAGCGACGC CCAAGCCGCC GAAACCAACG CCAGCTCGCC CGAGCCGCTC
GCGGCCGGAG CCGACGGGGC CGTGCCGACC GAAGCCGACG ACGCAGCTGG CTCGGCCGAG
CCGCTTGCGG CCGCCGCTGC GGCTGACGAG GAGGCGGCTG GATCGGCCGC CTCTGGCCCA
GCCACTCCGT CCGACGCCGC GGCCAACAGC TCCTCCAGCT CCGGCCCAGC AGCTGCGGCT
GGGCATCGGT GGGTGCTGGA GCTGCCCGAC GAGCCCGTGA CGGTTCGCGC CGACCGGGAC
CGGCTGCACC AGGTGCTGGC CAACATCCTG GCCAACGCCC GCGTCCACAC CCCCGCCGGT
ACCACCGTCA CCGGCCGGGT CGAACACGTG GATGCCGGGG CCGTCGTCGT CATCCGTGAC
GACGGCCCCG GCATTCCCCC TCACCTTCTG CCGCAGGTGT TCCAGCGATT CACCCGCGGT
GATTCGTCCC GCTCCCGAGC CTCCGGGAGT ACCGGCCTGG GACTGGCCAT TGTCGAGGCG
GTCATCGGCG CCCACGACGG GGAAGTCTCG ATCGACAGCG AACCGGGTGC GACCACGGTC
CGCATCACAC TGCCGTGA
|
|---|
| Protein sequence | MRRPWSLRAR LVAATIGLLA VVSAVIATVT TIALSSYLYD QLDHQLAATA ARSAGPGAPT
DGVSFLAQPG QPIGTIGGLV DANGEITDAA VSREPGGPGP ADPADRLTTL DEDQIAALEK
VEGSAKPSTV EVPGLGEYRV VTLDSPHGAS VLVGLPTAQV AGTVDTLIVV ESLVAGTGLL
AAGIAAAVAV RLALRPLRRV AATASRVSEL PLSSGEVSLT ERVPDADPRT EVGQVGTALN
RLLGHVGAAL KARHDSETRV RRFVADASHE LRTPLASIRG YAELTRRGHE SIGPDTRHAL
GRIESESTRM TGLVEDLLLL ARLDSGRPLA MTDVDLSALL VDTFSDAQAA ETNASSPEPL
AAGADGAVPT EADDAAGSAE PLAAAAAADE EAAGSAASGP ATPSDAAANS SSSSGPAAAA
GHRWVLELPD EPVTVRADRD RLHQVLANIL ANARVHTPAG TTVTGRVEHV DAGAVVVIRD
DGPGIPPHLL PQVFQRFTRG DSSRSRASGS TGLGLAIVEA VIGAHDGEVS IDSEPGATTV
RITLP
|
|---|
| |