Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5246 |
Symbol | |
ID | 8886455 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 5571427 |
End bp | 5572422 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | transcriptional regulator, AraC family |
Protein accession | YP_003513973 |
Protein GI | 291302695 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.893549 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGCACCA TCGACCGCCT CATCGTCATC GCGCTGTTCG ACCGCGTCGA CCTGCTCGAC GTCACCGGAC CGCCGGAGGT GTTCTCGCTG CTGCAACGCG AACTGGACGA ACCGAGCGGC TACCGGGTGG TCCTGGCCGC GCGCAGCCTC GACCCCGTAA CCACCTCGGC CGGGGTGCGG GTTCTTCCCG ACCTCACCTT CGACGACGTA TCCACAAAGG CCATCGACAC GCTGGTGGTG CCCGGCTCGG TCGACACCGA CACCGACCGC CGGGTCCGCG CCCTGGCCGA TCCGGAGGTC GTCGAGTGGG TGCGGCGCCT GGCCCCCAAC ACCCGCCGGG TCGCCTCGGT CTGCGTCGGC GCCCACATCC TCGCCGCCGC CGGGCTTTTG GACGGCCGAC GCGCCACCAC CCACTGGTCC ACCGCGCAAC AGCTCGCCAC CGAACACCCG TCGGTCACAG TGGACGCCGA CCCGATCTTC ATCCGGGACG GCGACGTGTG GACCGGCGCG GGTCTGAGCG CCTGCCTCGA CCTGGCGCTG GCCCTGGTCG CCGACGACTT CGGCGAGACA CTGGCGCTGG GCGTGGCCCG GCAGCTGGTG ATGTACCTCA AGCGCCCCAG CGGACAGAGC CAGTTCAGCG TCTCGCTCGA CCCGGTCTCG ACCACCCGCC GCATGGACCA GCTGCGGCTC CACATCACCC GCAACCTCGC CAAGCCGCTC AACGTCGGTG AACTGGCCCG GCACCTCCAC GTCAGCGAAC GCCACGTGAC CCGGGTCTTC AAGACCGAAC TGGGAACCAC CCCGGCGGCC TACATCGAAT CGGCCCGCGT CGAGGCCGCC CGCAACCGGC TGGAGACCAC CGACGACACC CTGGAACGGG TCGCGACCGG CTGCGGCTTC AACACCGTCG ACACGCTCAC CCGGGCGTTT CGGCGGCAGC TCAACACCAC CCCGACCGAG TATCGCAACC GGTTCCGGCT CACCCCGCGA AGCTGA
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Protein sequence | MGTIDRLIVI ALFDRVDLLD VTGPPEVFSL LQRELDEPSG YRVVLAARSL DPVTTSAGVR VLPDLTFDDV STKAIDTLVV PGSVDTDTDR RVRALADPEV VEWVRRLAPN TRRVASVCVG AHILAAAGLL DGRRATTHWS TAQQLATEHP SVTVDADPIF IRDGDVWTGA GLSACLDLAL ALVADDFGET LALGVARQLV MYLKRPSGQS QFSVSLDPVS TTRRMDQLRL HITRNLAKPL NVGELARHLH VSERHVTRVF KTELGTTPAA YIESARVEAA RNRLETTDDT LERVATGCGF NTVDTLTRAF RRQLNTTPTE YRNRFRLTPR S
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