Gene Snas_5244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5244 
Symbol 
ID8886453 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5568152 
End bp5569957 
Gene Length1806 bp 
Protein Length601 aa 
Translation table11 
GC content69% 
IMG OID 
Productserine/threonine protein kinase 
Protein accessionYP_003513971 
Protein GI291302693 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.423836 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAC TCTCCGAACC CCTCGAACTC GGTCGGTACC GGCTGGTGGC CGAACTCGGC 
CGTGGCGCGA TGGGCATCGT GTACCTGGGG GTCACCGAGG ACGGCACCCT GGTGGCGCTG
AAGCGGGTGC GGGAACAGTT CCTCGACGAC GACGAGTTCC GGGCCCGGTT CCGTCGCGAG
GTGGACTCCT CCAAGAAGGT GTCCGGCCCC CGCACCGCCG CCGTGATCGA CGCCGACGTC
GACGACAACC CGCCGTGGCT GGCCTCGGAG TTCGTATACG GCCCAACGCT TGAGGCCGCC
ATCGCCGAGG TCGGCCAGCT GCCGGAGTCC TCGGTGTTGC TGCTGGCCCA GGGGCTGGCG
TCGGCGCTGT CCGACATCCA CCGGACCGGG TTGATCCACC GCGACCTCAA GCCGTCCAAT
GTGATCCTGG CGCCGGACGG GCCGCGCGTC ATCGACTTCG GGATCGCGCG CGCGGCCGAG
ACCGAGGGCG GCACCGACAT CACCCACACC TCGTGGCTGC TCGGCTCGCC GGGCTACATG
TCGCCCGAGC AGGCCGAGAG CAAGGCCCTG ACCACCGCCA GCGACCTGTT CTCGATGGCC
ACGGTGCTCT ATGTGGCCAG TACCGGCACC AATCCCTTCA AGGGGGCCGG TTCGCCACAG
ACCATGTACA ACGTCGTGCA CGCCGAACCC GATCTGGACG TGCTGCCCGA CGCGGTCCGC
GAGATAGTCG AACCCTGCTG GGCGAAGGAT CCCGAGGCCC GGCCCACGGC GGCGCAGCTG
CTGGACCGCA TCCCGGTCGC GGCCGAGCGG CCCTGGCCCG AGGGCCTGGT CGCGCTGGCG
GCGGCACAGC GGGTCACCGT CGCGGGGATG CTTCCCGACG ACACGGTCCG GTTCCACGAC
GGCGGCACCC AGGTCCTCCC CGAGGATGCC GAAGCGCCGC AACCCGAACC GGCGGCGGCC
GAGGCGCCCG ACTGGGAGGC CCCCGGGCCG GATCCGGCCG CGAGCCCCGC CCCGGGAGTC
GACCCGGCCT GGGCACCGCC GCCGCCCGGG TCGGAGGCGT TCGACGCACC GCCGCCTCCT
CCCCCAGCGC CGCCGTTCGC TCCGACGCCG ACGCCCGCCT TCGGTTCCGC GTTGACCACC
GGGCAGATCG CCGGGATCGT CGTCGCGGGC GTGGTCGGCC TGCTGCTGGT CGCGGGGCTG
ATCTCCGTCG GCATCGACAG CCAGAACGCC TCCGACAGCA GTGATTCGGC CACCTCGGAC
TACGACTACG GCAACGACGA AGAGACCACC TACGACGACT ACACCGACGA CGGTTACACG
GAGGACGACT ACACCGAGCC GGAGCCCACC CAGGACGACA TCGTGGACGT CAGCGCCGGT
GACTGCGTCT ACGGTTCCCC CGACGTGGGC GCCAACTGGG ACATCCAGTC CTGCGGCACC
GGCAACTTCA CGGTGCTGGA GCGCATCGAC GGCTCGGGTG ACTACAACGC CTGCGACTCG
TCCGACCACA TGCTCGACTA TGGCCAGCAG ATCACCGACT ACGGCGACAC GAACTTCGTG
CTGTGCCTGT CGATGAACTG GGCCCAGGGC GACATCGGGC ACGCGCCGCA GGACACCTGC
CTGTACCGCA CCGGTTCCGG CGGTTCGGCG GTCTTCGAGT TCGTCGAGTG CGACCAGGCC
AACGCCATCG TCACCGGCTT CAACGACAAC TACGACGACG CCGGTTTCTG CAGCGGCTAC
GGCTATGCCT CCGCCCAGGA TCCCACTTTC GACATCGCCT ACACCGTTTG TTACAGCGAC
TACTGA
 
Protein sequence
MKRLSEPLEL GRYRLVAELG RGAMGIVYLG VTEDGTLVAL KRVREQFLDD DEFRARFRRE 
VDSSKKVSGP RTAAVIDADV DDNPPWLASE FVYGPTLEAA IAEVGQLPES SVLLLAQGLA
SALSDIHRTG LIHRDLKPSN VILAPDGPRV IDFGIARAAE TEGGTDITHT SWLLGSPGYM
SPEQAESKAL TTASDLFSMA TVLYVASTGT NPFKGAGSPQ TMYNVVHAEP DLDVLPDAVR
EIVEPCWAKD PEARPTAAQL LDRIPVAAER PWPEGLVALA AAQRVTVAGM LPDDTVRFHD
GGTQVLPEDA EAPQPEPAAA EAPDWEAPGP DPAASPAPGV DPAWAPPPPG SEAFDAPPPP
PPAPPFAPTP TPAFGSALTT GQIAGIVVAG VVGLLLVAGL ISVGIDSQNA SDSSDSATSD
YDYGNDEETT YDDYTDDGYT EDDYTEPEPT QDDIVDVSAG DCVYGSPDVG ANWDIQSCGT
GNFTVLERID GSGDYNACDS SDHMLDYGQQ ITDYGDTNFV LCLSMNWAQG DIGHAPQDTC
LYRTGSGGSA VFEFVECDQA NAIVTGFNDN YDDAGFCSGY GYASAQDPTF DIAYTVCYSD
Y