Gene Snas_5222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5222 
Symbol 
ID8886431 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5549241 
End bp5549759 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content69% 
IMG OID 
Productglutaredoxin/malate transporter fusion protein 
Protein accessionYP_003513949 
Protein GI291302671 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.275883 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.897552 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCAT CACGTTCGGA CACCGTGGTG GGCAGGCTGT TCGCCTTCCC CAACCCGGTC 
AACGAGATCT CGGCGCGCCT GGTCGCGGGC GGGGTGGTGC TGATGTGCGT GGCGGCGATC
GCCTTCGACC AACCCTGGCT CACCGCCGTC ATCGCCTACG GCTTCGTCGC GCGAGTACTG
ACCGGCCCGA CGCTCAGCCC GCTGGGCCAG CTCGTCACCC GCTTCATCAC CCCCCGACTC
CCGGTCGAAC CCGTATGGGT CGCCGGTCCG CCCAAGCGGT TCGCGCAGGG CATCGGCGTG
GTCTTCTCGG TCACCGCCGC CGTCCTGGCG CTGGGGCTCG GTCTGCACAC GGCGGCCTGG
ATCGTGCTGG GGGCGCTGGC GGTGGCGGCC ACGTTGGAGT CGGTGTTCGC GTTCTGCCTG
GGCTGCAAGA TGTTCGCGGT GCTGATGAAG ACCGGCCTGA TCCCGGAGCA GGTGTGTCTG
GAGTGCTCCG ACCTGTCACT GCGCTACGGG ACTCGCTGA
 
Protein sequence
MNASRSDTVV GRLFAFPNPV NEISARLVAG GVVLMCVAAI AFDQPWLTAV IAYGFVARVL 
TGPTLSPLGQ LVTRFITPRL PVEPVWVAGP PKRFAQGIGV VFSVTAAVLA LGLGLHTAAW
IVLGALAVAA TLESVFAFCL GCKMFAVLMK TGLIPEQVCL ECSDLSLRYG TR