Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5220 |
Symbol | |
ID | 8886429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 5546315 |
End bp | 5548357 |
Gene Length | 2043 bp |
Protein Length | 680 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | 5-oxoprolinase (ATP-hydrolyzing) |
Protein accession | YP_003513947 |
Protein GI | 291302669 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.46382 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.858688 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGCACG AGACCCGGGT GGCCATCGAC GTCGGCGGGA CGTTCACCGA CGTCGTCACG CTTCGGCCCG ACACCGGCGA GTTCCGGTTC GAGAAGGTCC CCACCACCCC CGAGGCCCCC GCGCGCGGCG TCCTGGACGC CTTCGGCGCG GCCGAAGTGG ACATGCCGGA CGTGTCGATG TTCAACCACG GCACCACCCT GGGACTGAAC TCGCTGCTGA CCCGCACCGG CGCCAAGGTG GCCGTGGTCG GCACCCGGGG CTTTCGCGAC GTGTACCTGC TGGGCCGCAC CAACCGCGAC GTCATGTACG ACATCGCCTA CCGCAAACCC GAACCGCTGC TGGAACGCTA CGACACCTTC GAGGTCGCCG AACGGTCCTA TTTCGACGGC ACCGTCGCGA CCCCGCTGGA CGAGGCCGAC GCGGCCCGCG TCGCCGCCCA GATCGGCGAG CGCGACTACC AGGCCGTCGC GGTGGCATTC CTGCACTCCT ACGCCAATCC GGCGCACGAG ACCCGGATGC GCGAGATCCT GCTGGAACAC TGTCCCGACG TCGAGGTGAC CGTCTCGCAC GAACTGTCCC GCGAGTACCG GGAGTACGAG CGCACCTCCA CCGCGGTGCT GGACGCCTAC ATCAAGCCGA TCGTCCGGCG CTACCTCGCC GAACTCGACG ATGGACTCAC CGACGCCGGA TTCGGCGGCC GGTTCCTGAT GTCGCGGTCC GGTGGTGGCG CCATGACCGC CGAGGCCGCC CGGGAACAAC CGGTCAACCT GATCCTGTCG GGCCCCGCCG GCGGCGTGGT CGGCGCGGCC GGGTTCGCGA AACTGTTGGG GCGCCCCAAT CTCATCACCA TCGACATGGG AGGAACCAGC CTGGACGCGT CGCTGGTTCT GGACTCCACC CCGGTCGCGC ACCAGGGCGC CGAGTTCGAG GGGATGCCCA TCAACACGCC CTCGCTGTAC ATCCACACCA TCGGCTCGGG CGGCGGCTCC CTTGTGTACC TCGACGACGC CGGGGCGTTG CAGGTCGGCC CGAAGAGCGC CGGGGCGGTA CCGGGTCCGG TGGCCTACGG TCGCGGCGGC ACCCGGCCCA CCTTCACCGA CGCGGCGCTG GCCGTCGGTT ACCTCGGCGC CGACACGCCG CTGGGCGGCA CACTCGCTCT CGACGCCGAC GGTGCCCGGG AAGCGTTGCG GCCCATCGCG AACCAACTGA ACTACTCCAC CGAGGAACTC GCGCGCGGCG TCCTGCGCAT CACGAACACG AAGATCATGG GCGCGGTACG GGCGATCACC GTGGAACTCG GCCACGACCC CAAGGACTTC GCGCTGCTGT CCTTCGGCGG CGCCGGGGGA CTGGTCGCCG TCGACGTGGC CCGCGAACTG GGCATCCCCG AGGTGGTCGT GCCGCCGGGA CAGGGCGCCT TCTCGGCGCT GGGCATGCTC ATGGCCGACG TCCAGCACGA CCTGTCCCGC ACCGCCGTCA CCGCCCTGGC CGATGTGGAC CTCGACGGGA TGGGCGCCGC CTACGCCGAC CTGGAGGCCG AGGCCGCCGT CCAGCTGGAA CACGAGGGCT TCGCCCCCGA AGCCCGGCGC TACGAACGCA GCGTCGACGT GCGCTACAGC GGCCAGGAAC ACTCGGTCAG CGTCGCGTTC CCCTCCGCTG TGGACGACAC GATCGCCGTG ATCGAGGCCG AGTTCGCCGA AGCCCACCGA CGCCAGTACG GCCACGTCAT GGACGACCCG GTCGAGATCA CGACACTGCG GCTGCGCGCC ACCGGCGTCG TCGACAAACC CGAACTCCCG TTGGCGCCCA AACGAACCGG CGAACCACTG CGACCGCGCG GCAGTCGGGT GGTGCACGAG ACCGACGGCT CCACCGCCGA CTACGCGCGC TACGCCCGCG AGGACTTCGC CGCCGGAGAC GCCTTCACCG GACCGGCCGT GGTCACCGAG CACACCGCCA CGACGGTGCT GCACGACGGC GACCGGCTCG ACGTCGGGCC GCACGGCGAA CTCGTCATCA CACTCGGAAG GGAAACGGCA TGA
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Protein sequence | MQHETRVAID VGGTFTDVVT LRPDTGEFRF EKVPTTPEAP ARGVLDAFGA AEVDMPDVSM FNHGTTLGLN SLLTRTGAKV AVVGTRGFRD VYLLGRTNRD VMYDIAYRKP EPLLERYDTF EVAERSYFDG TVATPLDEAD AARVAAQIGE RDYQAVAVAF LHSYANPAHE TRMREILLEH CPDVEVTVSH ELSREYREYE RTSTAVLDAY IKPIVRRYLA ELDDGLTDAG FGGRFLMSRS GGGAMTAEAA REQPVNLILS GPAGGVVGAA GFAKLLGRPN LITIDMGGTS LDASLVLDST PVAHQGAEFE GMPINTPSLY IHTIGSGGGS LVYLDDAGAL QVGPKSAGAV PGPVAYGRGG TRPTFTDAAL AVGYLGADTP LGGTLALDAD GAREALRPIA NQLNYSTEEL ARGVLRITNT KIMGAVRAIT VELGHDPKDF ALLSFGGAGG LVAVDVAREL GIPEVVVPPG QGAFSALGML MADVQHDLSR TAVTALADVD LDGMGAAYAD LEAEAAVQLE HEGFAPEARR YERSVDVRYS GQEHSVSVAF PSAVDDTIAV IEAEFAEAHR RQYGHVMDDP VEITTLRLRA TGVVDKPELP LAPKRTGEPL RPRGSRVVHE TDGSTADYAR YAREDFAAGD AFTGPAVVTE HTATTVLHDG DRLDVGPHGE LVITLGRETA
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