Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5219 |
Symbol | |
ID | 8886428 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 5544612 |
End bp | 5546318 |
Gene Length | 1707 bp |
Protein Length | 568 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | 5-oxoprolinase (ATP-hydrolyzing) |
Protein accession | YP_003513946 |
Protein GI | 291302668 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.667486 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.287509 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGACG CGGTAACCCT GGAGGTCATC CGGCACGGCC TGCTGGCGGC GGCCGAGGAG GTCGCGCGAA ACCTGTGCCG CACGGCCTAC AACACCGTCG TGTACGAGAT CCACGACTAC GGCATCGGCA TCCACGACGC CGCCGGAGAC GTGGTCGCCG ACGCGCCCGG CATCGCGGTG TTCACACGCG GCAACGACCA CGGCATCAAG AAGTCCATCG AGTTCCTGGG CGTCGAGACC ATGGAACCCG GCGACGTCTT CCTGCTCAAC TATCCCTATT GGTCATCGGC GCACACCCTC GACCCGCTGG TGTTCGCGCC CATCCACATC GACGACGCGC TCATCGGCTT CGCGTCCTGC CGGGTCCACG TCCTCGACCT CAACCAGAAG GACCCCGGCT ACGTCCTGGA CTCCACCCAC GCCAGCCAGG AGGGCCTGGT CTTCCCGGCC GCGAAACTGT ACCGGCGCGG CACCCCGAAC CAGGACATCC TCAACCTGAT CCGCTTCAAC TCCCGGATGC CCGAACGCAC CATCGGCGAC ATCCAGGCGC AGGTCGCCGC CTGCCACGCC GGAGTGCGAC GCACCCAGGA ACTGGCCGCG AAATACGGCG CGGACGCCCT CACCGCGGCG ATGAGCGAGA TCAACACCCA CGGCGAGAAA CTCGCCCGCA TCGGACTGTC CACACTACCC AAAGGCACGT GGAGTGCCAC CGACTTCCTC GACAGCGACG GCATCGACAC CGACACCCTC GTCAAACTGC ACGTCACGGT CACCATCTCT GACGAGGAGA TGGTGGTGGA CTGGACCGGC TCGGCCACCG GCGTCAAGGG CCCGATCAAC GTCCCCCGCG GCCAGACCGA AGCGCTGTCC AGCCTCATCT TCAAGTCACT GACCACACCG GACACCCCGG TGGTGGCGGG CAACTTCGCG CCGCTGCGGG TGGTCACCGA ACCGGGTTCG GTCATGCACG CGGTACCACC CATGCCGACC TTCACACTGT GGACGGGCCT GTTGGCCGGT GAGGTGATCC TCAAGGCGCT GGCCCAGGGC ATGCCCGACC GGGTGCCCGC CTGTTCCGGC GGCGACGTCT GCTCGATGAT GGGCCTGGGC GTCAACCCGC GCGACGGACG GCAGTGGCTG GAGGCCACCA ACGAGGCGGT CGGCTTCGGC GCCTCGGCCT TCGCCGACGG CGAGGACGGG ATCATGCACC TGTCGGAACC GGGCTGCCGC AACAACCCCG TCGAGGTGCT GGAGACGAAG TCTCCCATGA TCATCGACCA CTACGGGTAC CGTCCCGACA CCGGCGGACC GGGCAGGTTC CGGGGCGGCG TCGGAGTGTC CCGTGTGTAC CGGTTCACGG CGCCCTCGAC CGGGATCTGC CTGGTGTACA AGACGAAGTC GCCACCGTGG TCCATCGACG GCGGCGGCGA GGGCGTGCCC AACCGGATGG TCCGCAACGC CGGAACCGAA CGCGAGAAGA TCCAGGCGGG CAGCTACAAC CGCCTCGACG CGGGCGAGAC ACTGTCCAAT CAGACCGGTG GAGGCGGCGG CTACGGCGAC CCCTTCCACC GCGACCCGGC CGCGGTGGCG CGCGACGTCC GCAACGGTTT CGTGTCAGCC GAATCGGCAC TCAAGTCCTA CGGCGTGGTC GTCAACCCGG ACTACACCGT CGACGAACCC GCCACCGCCA CCGCGAGAGG GAACTGA
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Protein sequence | MSDAVTLEVI RHGLLAAAEE VARNLCRTAY NTVVYEIHDY GIGIHDAAGD VVADAPGIAV FTRGNDHGIK KSIEFLGVET MEPGDVFLLN YPYWSSAHTL DPLVFAPIHI DDALIGFASC RVHVLDLNQK DPGYVLDSTH ASQEGLVFPA AKLYRRGTPN QDILNLIRFN SRMPERTIGD IQAQVAACHA GVRRTQELAA KYGADALTAA MSEINTHGEK LARIGLSTLP KGTWSATDFL DSDGIDTDTL VKLHVTVTIS DEEMVVDWTG SATGVKGPIN VPRGQTEALS SLIFKSLTTP DTPVVAGNFA PLRVVTEPGS VMHAVPPMPT FTLWTGLLAG EVILKALAQG MPDRVPACSG GDVCSMMGLG VNPRDGRQWL EATNEAVGFG ASAFADGEDG IMHLSEPGCR NNPVEVLETK SPMIIDHYGY RPDTGGPGRF RGGVGVSRVY RFTAPSTGIC LVYKTKSPPW SIDGGGEGVP NRMVRNAGTE REKIQAGSYN RLDAGETLSN QTGGGGGYGD PFHRDPAAVA RDVRNGFVSA ESALKSYGVV VNPDYTVDEP ATATARGN
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