Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5217 |
Symbol | |
ID | 8886426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 5542055 |
End bp | 5543383 |
Gene Length | 1329 bp |
Protein Length | 442 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | major facilitator superfamily MFS_1 |
Protein accession | YP_003513944 |
Protein GI | 291302666 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.121674 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.248964 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCATCC CGCAAGCCCC GGCGACGCCC GACACCGAAG CCGTCGGCAC GATCTTCACC CGCATGCCGC TGAACCGGCG GCACCTCATG GCCGGATTCG CGCTCTTCTT CGCCTTCGTC ATCGAAGCCT GGGAGATGCT GATCCTGTCC TATATCGCCT CCGATGTGGA GGCCGAACTC CAGGTCGGCG ACACCGCCAT CGGATTCCTC ATCTCGGCGA TGTTCTTCGG CATGATCCCC GGCGCGCTCG CCTGGGGCGT GTACGTGGAC CGCAAGGGCC GCAAACCCGC CTGCGTCATC AGCCTCGCCG CCTACGGCGT GATCTCGGCG GTCTCCGCCC TGTCCCCGAA CTACTGGACA CTATGGAGCC TACGGTTGCT GTCCGGGGTC GCGCTCGCCG GAATCCTGGT GACCGTGTTC CTGTACTTCG AGGAACTCAT CCCGGTGAAG TACCGGGGCC GCGCCACGGT CTTCCTGGCC GCGGGCTGGC CGTTCGGCAC CCTCATCGCC GTCGGCGTCG CCTCCGGATT CCTGGAGTTC GCGGGCTGGC GCTGGGTGAT CGTGATCAGT TCCCTGTCCG GCCTGTGGGC GCTGGTGGTG TGGAAATGGG TGCCCGAATC GCCGTACTGG CTGGTCAAGA ACGGCCGCAT CGAACAGGCA CGCGCCGCGA TCACCTGGCT GTCCAACGGC GCGATGACGG TGGCGCGCAA CCTGACCCTG GCCACCTCCG GAGCCATCGT GCCCGCCGGA CCGACCAAAC GCAAACTGAC GATGTTCACG CTGGTCCAGA TCATCATCAA CTTCTCGCTG TCGTGGGGCT ACTGGGGACT CCAGACCTGG CTGCCGGGCC TGCTGGCCGA ACGGAACCTG TCGCTGCCCG ACTCCTACGG GTTCATCGCG CTGTCGGCGG TGTTCATGCT GCCGGGGTAC TTCACCGCGT CCTATATGAC CGGGAAGTTC GGACGCAAGA AGACCTACCT GCTGTTCGTC CTCATGGGAA CCGTCGGCGG CCTCACCTTC GCCTACGCCC CCAACCTGTT GTGGCTGTAC GTCGGCAACT TCCTGATGTC GTTCTTCGCC CAGGGCGCCT GGGGCGTGTG GGACACCTGG CTCGGCGAGA TCTACCCGAC CGCCGTGCGC GGCAAGGGCT ACTCGATCGG CATCACCGCG CAGCGCGTCG CCAACGCCAT CGCACCCACC CTGATCGGAT TCCTCGTCGC CAGCGCGATC GGCTTCACCC CGACGGTCGT GTTCATCGAG GCGTTCTTCG TCATCGCGCT GATCTTCGCG CTGTGGCTGC CCGAAACCGA AGGCGCCGAA CTGGACTGA
|
Protein sequence | MTIPQAPATP DTEAVGTIFT RMPLNRRHLM AGFALFFAFV IEAWEMLILS YIASDVEAEL QVGDTAIGFL ISAMFFGMIP GALAWGVYVD RKGRKPACVI SLAAYGVISA VSALSPNYWT LWSLRLLSGV ALAGILVTVF LYFEELIPVK YRGRATVFLA AGWPFGTLIA VGVASGFLEF AGWRWVIVIS SLSGLWALVV WKWVPESPYW LVKNGRIEQA RAAITWLSNG AMTVARNLTL ATSGAIVPAG PTKRKLTMFT LVQIIINFSL SWGYWGLQTW LPGLLAERNL SLPDSYGFIA LSAVFMLPGY FTASYMTGKF GRKKTYLLFV LMGTVGGLTF AYAPNLLWLY VGNFLMSFFA QGAWGVWDTW LGEIYPTAVR GKGYSIGITA QRVANAIAPT LIGFLVASAI GFTPTVVFIE AFFVIALIFA LWLPETEGAE LD
|
| |