Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5185 |
Symbol | |
ID | 8886393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 5508420 |
End bp | 5509997 |
Gene Length | 1578 bp |
Protein Length | 525 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | drug resistance transporter, EmrB/QacA subfamily |
Protein accession | YP_003513913 |
Protein GI | 291302635 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.804488 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.490544 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACAGAAA GCGAAGCCGT CGCCGAAGCG CCGGCCAAGG GACTGCGACG CGAGGTGCTG GTGGTTCTTC CCGGCCTCAT GCTCGCGATC CTCTTGGCCA TGTTGGACAA CACCATCGTC GGTACCGCCC TTCCCACCAT TGTGGGCGAG TTCGGCGGCT ACGGACACAT GTCCTGGGTG GTGACGGCAT ACATCCTCGC CGCGACGGTT TCGACTCCCC TGTACGGCAA GCTCGGTGAC CTGTATGGAC GCAAGCGGCT GTTCATGTTC GCGATCGGTG TCTTCCTCAT CGGTTCGGTC GCCTCCGGTG CGGCCCAGAG CATGGAGCAG CTGATCGCCT TCCGCGCACT GCAGGGCCTG GGCGCCGGTG GCCTCATGGT CGGCGTCATG GCGATCCTCG GCGACTTGGT CCCGCCCCGC GAACGCGGCA AGTACCAGGG CTTCATGGCC GCGGTCATGA TGGTCGCCAC CATCGGCGGC CCGCTGGCCG GTGGCCTGCT GACCGACCAC GTCGACTGGC GCTGGGCCTT CTACATCAAC CTGCCGCTGG GCGCGATCGC GCTGATCATC ATCGCCACGA CCCTGCATTT GCCCCGACAC CGCAACAAGG CCAAGATCGA CTACGCCGGA ATCGCGCTGT TGTCCGCGGT GGCCGCCAGC CTCGTGCTCG TCACCACCTG GGGCGGCAAC GAGTACGAAT GGGACTCCCC GCAGATCCTG GGCCTGTCGG CCTTCTCACT GGTGGCCCTG GTGGCGTTCA TCATGGTGGA GCGCAAGGCT GCCGAGCCGG TGCTGCCGCT GCGGCTGTTC ACCGACCGCA ACTTCACCCT GATCAACGTC GTCGGGTTCC TGCAGGGCTT CGCCATGTTC GGCGCGATGA CCTTCATCCC GATGTACCAG CAGATCGTCC AGGGCCTGAC CCCCACCGAA TCGGGCGTGT TCTTCATCCC GATGATGTTG GGCGCCATGG TGTTCTCGCT GGGTGCCGGA CAGATCATCA CCCGCACCGG CAAGTACAAG ATCTTTCCGA TCGCGGGTGG CGCCGTCATG ATCGCCGGAA TGCTGCTGCT GACCCAGCTG ACGACCTCCA CTTCGGAGCT GACCACCAGT ATCTACATGG TCGTGTTCGG CATCGGGCTG GGCCTGCTGA TGCAGGTGAC CATGCTGGTG GCGCAGAACA GCGCCCCGCA GCGGGACATC GGCGTCGCCT CCAGCACCTC GACGTTCCTG CGCAACATCG GCGGATCCTT CGGGGTGGCG GCGTTCGGTT CGATCTTCGC CAACCAGCTG ACCGAGTCCA TGAGCGGCAA ACTGCCGCCG GACATCGCGA AGAACTTCTC CGGCGGTGGC ACCGGCGGTC TGGAGCCGTC GAAGCTGGCC CAGCTGCCCG ACAAGATCAT GGACGTCGTC TCCGGCGGGG TCACCGACGC CATCACCACG GTGTTCGTGT GGACGATCCC GTTCGCGGCC TTGGGATTCC TGGTGGCCTG GTTCATCAAG GAGGTCCCGC TGCGCACCGG CGGACAGCCC GCCAAGGAAG AGCCGAAGGA GGCCGAGCCC GCAACCATCG CGGCCTAG
|
Protein sequence | MTESEAVAEA PAKGLRREVL VVLPGLMLAI LLAMLDNTIV GTALPTIVGE FGGYGHMSWV VTAYILAATV STPLYGKLGD LYGRKRLFMF AIGVFLIGSV ASGAAQSMEQ LIAFRALQGL GAGGLMVGVM AILGDLVPPR ERGKYQGFMA AVMMVATIGG PLAGGLLTDH VDWRWAFYIN LPLGAIALII IATTLHLPRH RNKAKIDYAG IALLSAVAAS LVLVTTWGGN EYEWDSPQIL GLSAFSLVAL VAFIMVERKA AEPVLPLRLF TDRNFTLINV VGFLQGFAMF GAMTFIPMYQ QIVQGLTPTE SGVFFIPMML GAMVFSLGAG QIITRTGKYK IFPIAGGAVM IAGMLLLTQL TTSTSELTTS IYMVVFGIGL GLLMQVTMLV AQNSAPQRDI GVASSTSTFL RNIGGSFGVA AFGSIFANQL TESMSGKLPP DIAKNFSGGG TGGLEPSKLA QLPDKIMDVV SGGVTDAITT VFVWTIPFAA LGFLVAWFIK EVPLRTGGQP AKEEPKEAEP ATIAA
|
| |