Gene Snas_5077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5077 
Symbol 
ID8886284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5392295 
End bp5392933 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content67% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003513806 
Protein GI291302528 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATGAGT CAACGCTTGA CCCACGGATC GTCCGATCCC GGGCGGTCAT CATGACGGCG 
GCCTCGGAAC ACTTCCTGCG CAAGGGATAC GTCGGCGCCA ATGTGGACGA GATCGCCGCC
GAGGCCCGGG TCTCCAAACG GACCGTCTAC AACATCTTCG GCACCAAGGA ACAGCTGTTC
CGCGAGATCC TCGCCGAGGC GTTCGGCACC GCCGAACGCT TCTCGCGCGA GACGGTCTCG
GTGCTGACCG ACACCGACGA CCTCGCGGGC GAACTCAAGG CGGTGGCGGT CCGGCTGGCC
CGCATCGTCC TCGACCCGAG GGTCGTGCGG CTGCGGCGGC TGCTCATCGG TGAGGCGGAA
CGGTTCCCCG AACTGGCCGG GGAGTACTAC CGGCGGGCAC CCGACCGCGT GATGGACACC
CTCGCCGAGG CCATCGGGCG ACTCGGCGAA CGCGGACTGC TGCGGGCAAG CGATCCGAGA
CTGGCCGCCG AACACTTCGC GTTCCTGGTC ATGGGCGCGG CACTGGACCG GGCGCTGTTC
ACGGTGGATG GCGAAACCCT GCCGCAGACC GAGATCGAGA CCCGCGCTGT CGCCGGGGTC
GCTGCGTTCC TGGCGGCATA CAAAGATGAG AATTCATGA
 
Protein sequence
MDESTLDPRI VRSRAVIMTA ASEHFLRKGY VGANVDEIAA EARVSKRTVY NIFGTKEQLF 
REILAEAFGT AERFSRETVS VLTDTDDLAG ELKAVAVRLA RIVLDPRVVR LRRLLIGEAE
RFPELAGEYY RRAPDRVMDT LAEAIGRLGE RGLLRASDPR LAAEHFAFLV MGAALDRALF
TVDGETLPQT EIETRAVAGV AAFLAAYKDE NS