| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4974 |
|---|
| Symbol | |
|---|
| ID | 8886181 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 5285533 |
|---|
| End bp | 5286093 |
|---|
| Gene Length | 561 bp |
|---|
| Protein Length | 186 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003513705 |
|---|
| Protein GI | 291302427 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.0603654 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACCAA GTTCCAAGAC AGCGATACTC GAAGCCTCGC GGCGGGTCGC CGAGCGCAGT
GGCATCGGCA GCCTGACCCT CGAGGCCGCC GCCCAGGAGG CGGGACTGAG CAAACCCGGA
CTGATGTACC ACTTCGCGAG CAAGGAACAG CTGCGCGTCG CGGTGGCGGA GTACATCACC
GAGGGCTGGC ACCAGCAGAT GCTCGCCGAG CTGGGCAAGC CGTTCGACGA CGCCACCCCC
GCCGAGCGGG TGGCCGCGTA CTGCCGGGTC TTCACCACCC TGTCCACCGG GAAGGGCGAC
CTGGTGCTGT TCGTCGACTC CGTGCACGAG GAAGCCCTGA TCGCGCCGTG GTGCGAACTG
TTGCGGCACT GGCTGTCGGA CTCGATTCCC CTCACGGACC CGGCCGACCC GGCGAGCATC
GACCTCGTCG TCGCCCGGCT GGCCGCCGAC GGACTGTGGA TGGCCGACGC GAGTCAGACC
ACCGGCCTCG ACGAGAACAC CCGCGCGGCG GTCGTCGCCC GGATCCAGCA GCTGGCCACC
GGGAAGGACG CGACGCGATG A
|
|---|
| Protein sequence | MRPSSKTAIL EASRRVAERS GIGSLTLEAA AQEAGLSKPG LMYHFASKEQ LRVAVAEYIT
EGWHQQMLAE LGKPFDDATP AERVAAYCRV FTTLSTGKGD LVLFVDSVHE EALIAPWCEL
LRHWLSDSIP LTDPADPASI DLVVARLAAD GLWMADASQT TGLDENTRAA VVARIQQLAT
GKDATR
|
|---|
| |