Gene Snas_4937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4937 
Symbol 
ID8886144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5247064 
End bp5247840 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content69% 
IMG OID 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003513671 
Protein GI291302393 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.451506 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.754378 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGTAC TCGACGGGGC CGAGGCGATC CACCTCGACG CAGGCCCCGA GACCCCAGCA 
TCCATTGTGG CGTGTCATGG TTTCTCCGGC ACCCCCGCCT CCGTCCGGCC CTGGGCGGAA
CACATGCACA AATGCGGATA CACCGTGACC GCCCCCCGGT TGCCCGGGCA CGGCACCCGG
TGGCAGGACA TGGCCGCCAC CCGCTGGCCC GACTGGTACG GCGCCCTGGA ACGCGCCTTC
GACGACGCGC TCGCCCGCGA CAAGCCGGTG TTCGTCCTGG GCCACTCCAT GGGCGGGACG
CTGGCGCTGC GGCTGGCGCA GCAGCGCGGC GCCGAGATGG CCGGGCTGGT GCTGTGCAAC
CCCTCGCTGT TCGACAAACG CTGGATGGTG CGGTTCGGGG TGCCGGTCGT CAAGCACTTC
ATCCGCTCGG TGCCCGGCAT CGGCAGCGAC ATCGCCAAAC CCGACACCTT CGAGACCAGC
TACCCCCGGG TCCCGCTGGC CGCCGTCCAC TCGCTGTCGC AGCTGTGGCG GATCGTGTCC
GCCGACCTGG CCAAGGTCAC CCTGCCGATC CGGGTCTTCC ACAGCGCCAT CGACCACGTC
GTCGAACCCC GCAACACCCA GCTGTTGCTG GCGGGCATCC GCAGCACCGA CGCCCGCGAC
CACATCCTGC CCCGCAGCTA CCACGTGGCC ACTTTGGACT ACGACGCTCC CCAGCTGTGT
GAGGGCACCG CCGCCTTCGT CGCCGAAAGG CTCAAGTCTC TACAGGAGAC CTCATGA
 
Protein sequence
MTVLDGAEAI HLDAGPETPA SIVACHGFSG TPASVRPWAE HMHKCGYTVT APRLPGHGTR 
WQDMAATRWP DWYGALERAF DDALARDKPV FVLGHSMGGT LALRLAQQRG AEMAGLVLCN
PSLFDKRWMV RFGVPVVKHF IRSVPGIGSD IAKPDTFETS YPRVPLAAVH SLSQLWRIVS
ADLAKVTLPI RVFHSAIDHV VEPRNTQLLL AGIRSTDARD HILPRSYHVA TLDYDAPQLC
EGTAAFVAER LKSLQETS