| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4743 |
|---|
| Symbol | |
|---|
| ID | 8885949 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 5045243 |
|---|
| End bp | 5045884 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003513478 |
|---|
| Protein GI | 291302200 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.832036 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.727268 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCG AGGCCAAGCC CCTACGCCGC GACGCCGCCC GCAACCGCGA CAAGCTGCGG
GCCGCCGCCT CCGAGGTGTT CACCGCCAAG GGCCTGGACG CCTCGCTGGA GGAGATCGCC
AAACACGCGA AGGTGAGCAT CGGCACCCTC TACAACCACT TCCCCACCCG CGAGGCGCTG
TTCGACGCGA TCTTCCCCGA GCGGGTCGAG GCGACCGAGG CGTTGGCCCG CGAGGCGCTC
ACAGCGGACG ACGCATGGGA CGGGTTCGCG GGGTACCTGG AGGGGCTGTT CGACATGCTG
GCCGCCGATC GGGGGTTGCG GCACGTGATG ACGCGCGAGT ACCCGGCGGC GGAGGCGCTG
ACCGAGGCGT GTCACCGGGG GTTCGCGGCG ACCGAGGCGA TCGTGTTGCG GGCCAGGGAA
TCGGGGAGCC TGCGGACCGA CTTCGAGATG TCGGACCTCG CGTCGGTGCT GTGGGCGATG
GCCCACATCA TCGACACCAC CGCCGATGTG GCGCCGGGCG CGTGGCGCCG GTTCCTGGCG
TTCATTCTGG ACGGTCTGCG ATCGGAAGCG GCACACCCGA TCGCTGTCGA GGCGATGCGC
CCCGAACAGA TCGTCGAGGC GCTGCTGGGC CCCAGCGACT GA
|
|---|
| Protein sequence | MTTEAKPLRR DAARNRDKLR AAASEVFTAK GLDASLEEIA KHAKVSIGTL YNHFPTREAL
FDAIFPERVE ATEALAREAL TADDAWDGFA GYLEGLFDML AADRGLRHVM TREYPAAEAL
TEACHRGFAA TEAIVLRARE SGSLRTDFEM SDLASVLWAM AHIIDTTADV APGAWRRFLA
FILDGLRSEA AHPIAVEAMR PEQIVEALLG PSD
|
|---|
| |