Gene Snas_4661 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4661 
Symbol 
ID8885866 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4969676 
End bp4970818 
Gene Length1143 bp 
Protein Length380 aa 
Translation table11 
GC content70% 
IMG OID 
Producthistidine kinase 
Protein accessionYP_003513397 
Protein GI291302119 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.249963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00746099 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGGCGAAG GCGAACGGCA CCAGCGGCGA TGGGACGTCA TCGCCGCCGG TGCGGCGACC 
GCGTTCGCGC TCGCCGCGGT GATCCACGAA ATGGACAAGA AGGAGTTCTG GCTTCCGGTC
GCGGCGGCCG TGCCGCTGGC GATACTGACC GGGCTGGCGC TGCTCGCCCG GCGTCGGTAC
CCGATCCCGG TGACGCTGTT CACCGGCTCG ATGACGGTCC TGTTCATCGC CTCGGACAGC
CGCGCCGGGA CCGTGGCCCT CCTCATCGCA CTGTACTCAT TGGCCAAGTA CGAACGCCGC
TGGATCGCGA TCGTCGCGGG CAGTGTCGTC ATCGTGGTGG GCACGGTGAC CGCCGGACTG
TCGGGCTCGT GGGAGATGGC CTCGCGGTCG GCGCCGTGGC TGGTCATCTT CCTGGAGGCG
GGAATCATCG CCGGGGACAT CGCCGGACGG CAACAGCGGG CACTGGAGTC GGCCCGATCC
CGCGCCGCCG AAGCCGAACG ATCCAAAGAG GAACTGGCGC AGCGCCGGGC CGCCGAGGAA
CGCGTCCGCA TCGCCCGCGA ACTCCACGAC TCGCTGACCC ACGCGATCTC GGTCGTCAAC
GTGCAGTCCT CGGTGGCGCT GCACATGCTC AACCGCCAGC CCGAACAGGC CGAGGCCTCG
CTGCGCAACA TCCGGGCGGC CAGCCAGGAC GCGATGCGGG AACTGCGGGC CACGCTGCGA
GCCCTGCGCA TGACCGAAGG CGACTCCACC CCCGGCATCG ACAGCCTCCC CGCGCTGGTG
GAACGCTCCG CGCTCACCAT CGCCATGGAC ATCAGCCCCG ACCGGCAAGC GCTGCCCGAG
ACCGTCGACC GCACCGTCTA CCGGATCGTG CAGGAGGCGC TGACCAACTC CACCCGGCAC
GCCCGGGCCA GTGCCGTCGA CATCTCTATT GTGGTCGATG ATGAGTCGGT GACGACGACC
ATCACCGACG ACGGCATCGG CCCCGCCCCC GAAGGCGTCG CCGAAGGGCT GGGCCTCATG
GGAATGCGCG AACGCGTCGC GGCACTGGGC GGCGACCTGC GCCCCGGCCC CGGCCCCGAC
GGCGGCTTCC AGGTCCGCGC CGTCCTGCCC CTGACCGAGA CCGAAGCCAA GGAGCTGACG
TGA
 
Protein sequence
MGEGERHQRR WDVIAAGAAT AFALAAVIHE MDKKEFWLPV AAAVPLAILT GLALLARRRY 
PIPVTLFTGS MTVLFIASDS RAGTVALLIA LYSLAKYERR WIAIVAGSVV IVVGTVTAGL
SGSWEMASRS APWLVIFLEA GIIAGDIAGR QQRALESARS RAAEAERSKE ELAQRRAAEE
RVRIARELHD SLTHAISVVN VQSSVALHML NRQPEQAEAS LRNIRAASQD AMRELRATLR
ALRMTEGDST PGIDSLPALV ERSALTIAMD ISPDRQALPE TVDRTVYRIV QEALTNSTRH
ARASAVDISI VVDDESVTTT ITDDGIGPAP EGVAEGLGLM GMRERVAALG GDLRPGPGPD
GGFQVRAVLP LTETEAKELT