Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4653 |
Symbol | |
ID | 8885858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 4960041 |
End bp | 4961234 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | ABC-type sugar transport system periplasmic component-like protein |
Protein accession | YP_003513389 |
Protein GI | 291302111 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.00066367 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGCGCTTGT TGAGAACCGC CGTGGCGGGC CTGGCGATAA CCGCCATGCT GCTGACCGGC TGTACCACCG ACAAACCCTC AGACGAAGCC GAAGGCAAGG ACGACAAGTC CTCCGAGGGC GACTGGTTCG TCAAGGAGGA CTACGAACGG CAGCTGAAAC AGCGCGACGC CGAACCCGAA GGCGACGCCG ACAAGCCCTA CCTGCAGGCC ATCGACCCCG ACTGGGTCGA GACCACCGAG TACAAGAAGA AGGGCGGCGA CGCCACCATC TGCTTCTCCA ACGCCTCGGT GTCCAACCCG TGGCGGGTGA CCGGCTGGCT CACCATGCAG GAACAGGTCA AGCAGCTGAA GAAGTCCGGT GAGATCAAGG AGTTCCGGGT CTCCGACGCC GAGGACAAGG ACAACAAGCA GATCTCCGAC ATCGAGGCCT TCGTGGACTC CGGCGACTGC GACAGCATCA TCATCTCGCC GTCCACCACC GCCACCCTCA CCCCCGCGGT CAAGACCGCC TGCAAGTCCG GGGTCCCGGT GGTGGTGTTC GACCGGGGCG TCGAGACCGA CTGCGCCGTG TCGTTCATCC ACCCGATCGG CGGCTACGCC TACGGTGCCG ACGGCGCCGA GTTCCTGGTG GACAAGCTGA AGCCCGGCTC CAAGGTGCTG GCACTGCGGA TCCTGCCCGG CGTCGACGTG CTGGAGAACC GTTGGGCCGC CGCCAAACAG ATCTTCAAGG ACAGCGAGAT CGAGGTCGTC GGCGACGAGT TCACCAAGGG CGACGGCGCC AAGATCAAGG ACATCGTCAC CCAGTACCTG GAACGCGGCG ACGTCGACGG CATCTGGATG GACGCCGGGG ACGGCGCGGT GGCCGCGCTG GAGGCCTTCG AGGACGCCGA CAAGGACTAC CCGGTCATGG TCGGCGAGGA CGAGATCGGC TTCCTGCGCA AGTGGAAGGA AACCAAGATC ACCGCGATCG CGCCGGTGTA CTCCAACTTC CAGTGGCGCA CCCCGGTGCT GGCCGCGGTG AAGATCCTCA ACGGCGAGAA GGTCCCGAAG GAGTGGGTGC TGCCGCAGGA GCCCATCACC GAAGACAACC TGGACGAGTA CCTCAAACGC AACAAGGACA TGCCGAACCT GCACTACGCC AAGTTCGGCG GCGAGGACCT GCCCGGCTTC CCCGACGCCT GGAAAGACCG CTAG
|
Protein sequence | MRLLRTAVAG LAITAMLLTG CTTDKPSDEA EGKDDKSSEG DWFVKEDYER QLKQRDAEPE GDADKPYLQA IDPDWVETTE YKKKGGDATI CFSNASVSNP WRVTGWLTMQ EQVKQLKKSG EIKEFRVSDA EDKDNKQISD IEAFVDSGDC DSIIISPSTT ATLTPAVKTA CKSGVPVVVF DRGVETDCAV SFIHPIGGYA YGADGAEFLV DKLKPGSKVL ALRILPGVDV LENRWAAAKQ IFKDSEIEVV GDEFTKGDGA KIKDIVTQYL ERGDVDGIWM DAGDGAVAAL EAFEDADKDY PVMVGEDEIG FLRKWKETKI TAIAPVYSNF QWRTPVLAAV KILNGEKVPK EWVLPQEPIT EDNLDEYLKR NKDMPNLHYA KFGGEDLPGF PDAWKDR
|
| |