Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4649 |
Symbol | |
ID | 8885854 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 4956151 |
End bp | 4957128 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_003513385 |
Protein GI | 291302107 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.000235602 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGACTTTTG ACTTTCTCGA TCAACTGCCG AAGTTCGGCG TGCTGGGCGT GGGACTGCTC GCGTTCCTGG CCGTCGTCTT CGCCGTCCTC TACATCGGCA ACGTCGTCCC CGACAAGCCG AAGAGCCTGA CCACCGGACT GGTGTTCCTG ATACCGACCC TGCTGCTGGT GGGAATCGGG CTCGTGGTCC CCGCGATCCG CACCACGATC CTGTCCTTCA CGGACAAGAC CGGTGAGGCC GCGGTGGGCT GGAAGAACTA CGAATGGATC TTCACCAGCC CCGACATCCT CCAGGTGGTC GGCAACAGCG CCCTGTGGGT GGTGTTCACG CCGCTTCTGG CCACCGCGGT CGGACTGGTG TACGCGATCC TCATCGACCG GTCCCGGTTC GAGTCGCTGG CCAAGACGCT GGTGTTCCTG CCGATGGCGA TCTCGTTCGT GGGCGCTTCC ATCATCTGGA AGTTCATGTA CACCGAACGC GAGATCGGTG ACCAGATCGG TCTGCTCAAC CAGATCGTGG TCTGGCTGGG CGGCAGCCCG ACGGACTTTT TGGCCATCCC GTTCTGGAAC AACTTCTTCC TGATCATCGT CATGGTGTGG ATCCAGGCCG GGTTCGCCAC CGTGGTGCTG TCGGCCGCGA TCAAGGGCAT TCCCGCCGAG ATCGTCGAGG CCGCCCGGCT CGACGGCGTC AACGCCTGGC AGATGTTCTG GCGGGTGACG GTTCCGTCGA TCCGTCCGGC CATCATCGTC GTCATCGTGA CGATGTCGAT CGCCTCGCTG AAGCTGTTCG ACATCGTGCG GACCATGACC GGCGGCAACG ACGGCACCTC GGTGCTGGCC TACGAGATGT ACTCGCAGTC CTTCCCGAGT CAGCAGACCG GCCGGGGCGC CGCCCTTGCC GTGGTGCTGT TCATCCTGGT CGTGCCGATC ATCATGTACC AGGTTCGCAA CATGCGTCAG CGCCGGGAGG TCAAATGA
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Protein sequence | MTFDFLDQLP KFGVLGVGLL AFLAVVFAVL YIGNVVPDKP KSLTTGLVFL IPTLLLVGIG LVVPAIRTTI LSFTDKTGEA AVGWKNYEWI FTSPDILQVV GNSALWVVFT PLLATAVGLV YAILIDRSRF ESLAKTLVFL PMAISFVGAS IIWKFMYTER EIGDQIGLLN QIVVWLGGSP TDFLAIPFWN NFFLIIVMVW IQAGFATVVL SAAIKGIPAE IVEAARLDGV NAWQMFWRVT VPSIRPAIIV VIVTMSIASL KLFDIVRTMT GGNDGTSVLA YEMYSQSFPS QQTGRGAALA VVLFILVVPI IMYQVRNMRQ RREVK
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