Gene Snas_4576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4576 
Symbol 
ID8885781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4882072 
End bp4883256 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content72% 
IMG OID 
Producthistidine kinase 
Protein accessionYP_003513313 
Protein GI291302035 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.312812 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.130927 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCGGG TTCGCGAGTT CGCCGGGAAG CGTCCGGTGA TCGCGGATGT CGTTGTGGCT 
GTAGTGGTCG CGGTGGTGTC GTTGCCCGCG ACCGTTGGTG GGGACACGGC GGCGGGGGTG
CTGGAGCCGG GCACAGGGGT GGTCGGGTTC GGCTGGCTGT GGTTCGTCGC CGTGCATGTT
CCGTTGACGT GGCGGCGGCG AGCGCCGGTC GTCGTGTTCT GGACGGTGCT GGGGCTGGTG
GCGGCGTGCG CGCTGGCCGG GATGACCGGC GTGTTCTTCG TGTTCGCGCC GCTGGTCGCG
CTGTACACGG TGGCGCGGCA TCGGTCGGTT CGGCGGCTGT GGCCAGCCGT CGCGGCGGTT
GCCATGGCAT TGGGTGTGGC GGCGGGGCGG GAACCGTCGC AGTGGCCCGC GATCGCGGGG
GTGCTGGCGG TTGTCGTCGC GGTCGCGGCG TGTGGCATCG CGGTGCGGGT TCGGCGCGCG
TTGCTGGACG AGCGGGCCCG GCGGGCGCGG GAAGAGCTTG AGCGGCAGGC GAAGGCGACG
GTTGCGTCGG AGCGGGAGCG GTTGGCTCGG GAGGTGCATG ACATCGTCGC TCATAACCTT
GCGGTGATGG TGGCGTTGGC CGACGGCGCC GCGCTCACCG TCGATGCGAG CCCCGCCGAG
GCGGGGGACA TGATGGGGAA ATCGGCGGCG ACCGGCCGGG AAGCGTTGGG GGAGCTGCGG
CGGCTGGTGC GGGTGCTGCG GGACGGGGAC GGGCAGCATC GCGGCGGCGA GCAGGCCGAC
GTCTCGACGG AGCCGCAAGC CCCGGAGCTG GAGCAGTTGG TGGAGCGGGT GCGGGAGGCT
GGGCTTCACG TCGAGCTGGT CCGCGACGGC GAACCGGTCG AACGGGAGGA CGTGGAGGCG
AGCGTCTACC GGATCGTTCA GGAATCGTTG ACCAACGTGC TCAAACACGC GGGTGCGGAA
GCAAGAGCGC GGGTCCAGCT GCGATACGAG GCCACCGGCG TCGAGGTCAC GATCGTGGAC
AACGGTGCGG GGCAAGCGAT CCAAGCCCGC GCGAGCGGCG GCCACGGGCT GGCGGGCATC
GCCGAACGCG CCAAAGCCCA CGGCGGGGAG GCCGAGGCCG GTCCCGTCCC CGGCGGTGGC
TGGCAGGTTC GCGTCCGACT GCCGTTCGCC GACGGCTCGG CGTAA
 
Protein sequence
MRRVREFAGK RPVIADVVVA VVVAVVSLPA TVGGDTAAGV LEPGTGVVGF GWLWFVAVHV 
PLTWRRRAPV VVFWTVLGLV AACALAGMTG VFFVFAPLVA LYTVARHRSV RRLWPAVAAV
AMALGVAAGR EPSQWPAIAG VLAVVVAVAA CGIAVRVRRA LLDERARRAR EELERQAKAT
VASERERLAR EVHDIVAHNL AVMVALADGA ALTVDASPAE AGDMMGKSAA TGREALGELR
RLVRVLRDGD GQHRGGEQAD VSTEPQAPEL EQLVERVREA GLHVELVRDG EPVEREDVEA
SVYRIVQESL TNVLKHAGAE ARARVQLRYE ATGVEVTIVD NGAGQAIQAR ASGGHGLAGI
AERAKAHGGE AEAGPVPGGG WQVRVRLPFA DGSA