Gene Snas_4567 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4567 
Symbol 
ID8885772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4874024 
End bp4874542 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content67% 
IMG OID 
ProductRNA polymerase sigma-24 subunit, ECF subfamily 
Protein accessionYP_003513304 
Protein GI291302026 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.499473 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGTCC GACACGACGC GGAGTTCCAG GAGTACGCGA GATCCAAATT GGATTCCATG 
CGGTACTTCG CCTACTTGTC CTGCGGCGAC TGGCATCGCG CCGAGGACGC CGTGCAGGTG
GCCTTCGTGA AGCTGTACGC CGCCTGGGGA CGCGCCGCGC GCGAATCCCT GGACGCCTAC
ACCCGGCGCA TCGTGGTGAA CGTACTCATC AACGAGGGCA GACGATTCCG GTTCCGGCGG
GAACACCTGG ACGACGACCC GGCCGTCCCG GTGACCTGGG ACGGCGACGA CCGCTCCGAC
GACCGGATGG TGCTGCTGCA GGCGCTGTCG GGACTGCCGC GCCGACAGCG CATCACGCTG
GTGCTGCGGT TCTGGGAGGA CCTGTCGGTG GAGCAGACCG CGGCGATCAT GCGCTGCTCG
CCGTCCACCG TGAAGAGTCA GTCCGTCAAG GGCCTGGCGG CGATGCGCGA TCGGCTTTCC
GGCAGCTTTC CCACCCTCCC GAAAGGAGCG ACGGCATGA
 
Protein sequence
MRVRHDAEFQ EYARSKLDSM RYFAYLSCGD WHRAEDAVQV AFVKLYAAWG RAARESLDAY 
TRRIVVNVLI NEGRRFRFRR EHLDDDPAVP VTWDGDDRSD DRMVLLQALS GLPRRQRITL
VLRFWEDLSV EQTAAIMRCS PSTVKSQSVK GLAAMRDRLS GSFPTLPKGA TA