Gene Snas_4562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4562 
Symbol 
ID8885767 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4867858 
End bp4868541 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content68% 
IMG OID 
ProductSOS-response transcriptional repressor, LexA 
Protein accessionYP_003513299 
Protein GI291302021 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.547089 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCAGTT CTCCGGCCAA AACCATAGTT CCCGACGCCA CCGATGACCT CGCCTCGGAC 
GCGAACGAGG CGACCCTGAC CGACCGTCAG CGCAAGATCC TGTCGTGCAT TCGTGATTCT
GTCGCCGATC GCGGTTACGC CCCCAGCGTC CGCGAGATCG GTCACGTCGT CGGGCTCGCT
TCGGCGTCCA GTGTGGCGTA CCAGCTCAAC CAGTTGCAGC GCAAGGGTTT CCTGCGCAAG
GACGCCCGAC GGCCGCGCGC CGTCGACATC CGCCCGGGCA GCTCGGGCGA GGCCGAGGGC
CTGCGCAAGG CCCCCAAGTA CGTTCCGGTG CTCGGTGAGA TCGCCGCCGG TACCCCGATC
CTCGCCGAGG AGCGGGTCGA GGAGATGTTC CCGCTGCCGG CCGAGTTCGT CGGCGAGGGG
GACGTGTTCC TGCTGAAGGT CAAGGGCGAC TCGATGATCG AGGCCGCCAT CACCGACGGC
GACTGGGTGG TCGTGCGACA GCAGCCCGAG GCGCACAGCG GTGAGATCGT GGCCGCCATG
ATCGACGGCG AGGCGACGGT GAAGACCTTC AAGCGGCGCG ACGGGCACGT GGTCCTGTTG
CCCGCCAACC CGATGTACGA CCCGATCCCG GCCGACGAGG CTCAGATCCT GGGCCGGGTG
GTCGCGGTGA TGCGGCGCAT CTGA
 
Protein sequence
MASSPAKTIV PDATDDLASD ANEATLTDRQ RKILSCIRDS VADRGYAPSV REIGHVVGLA 
SASSVAYQLN QLQRKGFLRK DARRPRAVDI RPGSSGEAEG LRKAPKYVPV LGEIAAGTPI
LAEERVEEMF PLPAEFVGEG DVFLLKVKGD SMIEAAITDG DWVVVRQQPE AHSGEIVAAM
IDGEATVKTF KRRDGHVVLL PANPMYDPIP ADEAQILGRV VAVMRRI