Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4415 |
Symbol | |
ID | 8885616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 4708709 |
End bp | 4709560 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_003513154 |
Protein GI | 291301876 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.241665 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCATCAG GACGTAAACC GACCATCCGT GCCGTATGGC TCGGACAGGA ACTTCGCAAG ATGCGCGACG AAGCAGGTTT GACGGTTCGG GCTATGGGCA GCTTGGTTCA CCTCAACCAA GCAAACGTGT CCAAGCTGGA GAACGGCATA TACCCCGCGA GTGTCCAACA TGTTGAGGCG TATCTACGCA TCTGCGGTAT CGACGATCCG AAACGGCGCT CCGATGTCTT CAAGATCTGC GACGACGTAT TGCGCAAAGG GTGGTGGGAC GGGTTCGCAG GCGAGCTTGC CTCCGAACTC ATGGACCGCA TCTGGCTCGA ATCAAAGGCG GTTCACATCG ATGCTTTTGA GCCAATCCTG GTACCGGGCT TGCTGCAAAC CTCCGCCTAT GCTCGTGCGG TTATGGCGGC CGACCAACCT GACGCGAGCT CTGAGCGACT TGAACGCTGG CATGACGTAC GCACTACCCG CCAACTCATC ATCACCAAGC ATGAGCCCAT CACACTTCGA GCCATCATCG ATCAATCCGT GATCCGAAGG GCCATAAGCG ATAGCGAGGC GGGACTACCG CAGCTGAGGT TTCTCGCGGA AGTTTCTGAG CGGCCAAATA TCGAGCTACG CGTCCTACCC GACAGTGCTG GTTTTCATGC CGGGATGAAC GGCAGCTTCG AAGTTCTGTC TCTCGCCGAC CCATACCCCG AAGCCGGACT TTTGACGACT CCCTCCGGCG AAGTCTGTGT GGAAGGCGAC GCCATTCATC ACCTCAAGCA GAAATATGAA CTCCTGCTAC AGTCCAGCCT TGACCCCGAG CCATCTCGTA AGCTCATCAA GTCAGAGGTA GACAAGCAGT GA
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Protein sequence | MASGRKPTIR AVWLGQELRK MRDEAGLTVR AMGSLVHLNQ ANVSKLENGI YPASVQHVEA YLRICGIDDP KRRSDVFKIC DDVLRKGWWD GFAGELASEL MDRIWLESKA VHIDAFEPIL VPGLLQTSAY ARAVMAADQP DASSERLERW HDVRTTRQLI ITKHEPITLR AIIDQSVIRR AISDSEAGLP QLRFLAEVSE RPNIELRVLP DSAGFHAGMN GSFEVLSLAD PYPEAGLLTT PSGEVCVEGD AIHHLKQKYE LLLQSSLDPE PSRKLIKSEV DKQ
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