Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4391 |
Symbol | |
ID | 8885592 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 4682571 |
End bp | 4684331 |
Gene Length | 1761 bp |
Protein Length | 586 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | (p)ppGpp synthetase I, SpoT/RelA |
Protein accession | YP_003513131 |
Protein GI | 291301853 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTTGCGGT CCATCTTGAA CCGTTCGACC CCCGACGATG ACCCCTGGGG ATTGCGCGCC CGGGTCGACG AACTGGAGAC GACCCACAAG GGCAAACATC CGGCGCCGGT GGTTCCGTTG CTGCGTAAGG CCTACCGTAT CGCCGAACAG ATGCACCGGG GCCAGAACCG CAAGAGCGGC GAGCCCTACA TCACCCACCC GATCGCGGTG GCCCAGATCC TGGCCGACCT CGGACTCGAC ACCACCACCA TCGCCGCGGC ACTGCTGCAC GACACCGTCG AGGACACCAG CTATACCCTG CAACGGCTGC GCGACGACTT CGGCGGCGAG GTGGCGCTGC TGGTCGACGG GGTCACGAAA CTGGACAAGG TGTACTTCGG TGAGGCCGCC GAGGCCGAGA CCTTCCGCAA ACTGATCGTG GCGGCGGGCC GCGACGTGCG GGTCATGGTC ATCAAGCTCG CCGACCGGCT GCACAACATG CGCACGATCG GCGCCAAGTC CCCCGCGTCC CAGAAACGCA TCGCCGAGGC CACCCGGGAC GTGCTGATCC CGCTGGCCGA CCGGCTGGGC CTGTACGTCA TCAAACGGGA ACTCGAGGAC ATCGTCCTGT CGACCGTCGA CACCGACGTC CACAAGGAGA TCGACGACTA CCTCAACGGC AACACCGACC GGGCCCGGCA GGTCGGGCGC GCGGTCGTCC AGTTGCGGGA GTCGTTCAAG GCCGCCAAGA TCGACGCCGA GATCATCGAC CGTCCCCGGC ACCACTACTC GGTGTACCGC GAGATGGCCA TCAACCCGCG GCGCGGACCC CAGGACCCGC CCCGGGTCGT GCTGGTCATC GACGGCCCCG TCACCGACTG CTACGCCGCG CTGGGCGAGG TGCACCGGCT GTGGCGGCCG CTGCCGGGCC GGTTCAAGGA CTTCATCGCC ACCCCGAAGT TCAACCTGTA CCAGTCGCTG CACACCTCGG TGATCGGTCC CGAGGACGAG CCGATGGACG TGCTGATCCG CTCGATGGCG ATGCACCAGA CCGCCGAGCT GGGCATCGCG GCCCACCTGG CCCGGGAATC GTCCCGCAAG AACAAGTCCG CCGAACTGAC CTGGCTGCAC CGGCTGCTGG ACTGGCAGTC CGACGCCATC GACCCGTCCC GGTTCCTGGA GTCGCTGCGC TGCGACCTGG CCGACGAGCA GATCCTGGTG TTCACCACCA ACGGCGGCCA GCACATCCTG CCCATCGGCG CCACCCCCGT CGACCTGGCC TACTGCATCA GCGCCTCCGA CGGCGACCGC CTCATCGGGG CCTACATCAA CGGGCACCTG GCGCCGCTGG CCGACCAGTT GTCCGAAGGC GACCTGGTCG AACCGATCAC CGCCGACGCC GCCAGCGGCT ACCCCGGACC GTCCAAGGAA TGGCTGCTGA GCGCCAAGAC CCCGCAGGCC CAACTGCTGA TCTCGCAGTG GTTCGCCGGT TACCGTGGCC CGCACGCCAC CGAGTCGGCG CGCACCGTCG GCGGCCAGCG CACCCTCACC GACCGCATCG AGGCGGGCCA TCTGGCGGTC AACGCGGCGC TGCGCCGCCG CGACCGCGGC CTGGCCTCCA CCGAACCGCT GCTGCGACTC GCCCTCGACC TGGGCTACCC GGACCTGGAC GCCCTGTACC TCGCGGTCTA CGACAAGAAG CTCGACGCGG GCGAGCTGGC CGACAAACTC ATCGCCTCGG TCGACCGGGA ACCCGAACCC GAAACCCTGC CCTCGCACTG A
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Protein sequence | MLRSILNRST PDDDPWGLRA RVDELETTHK GKHPAPVVPL LRKAYRIAEQ MHRGQNRKSG EPYITHPIAV AQILADLGLD TTTIAAALLH DTVEDTSYTL QRLRDDFGGE VALLVDGVTK LDKVYFGEAA EAETFRKLIV AAGRDVRVMV IKLADRLHNM RTIGAKSPAS QKRIAEATRD VLIPLADRLG LYVIKRELED IVLSTVDTDV HKEIDDYLNG NTDRARQVGR AVVQLRESFK AAKIDAEIID RPRHHYSVYR EMAINPRRGP QDPPRVVLVI DGPVTDCYAA LGEVHRLWRP LPGRFKDFIA TPKFNLYQSL HTSVIGPEDE PMDVLIRSMA MHQTAELGIA AHLARESSRK NKSAELTWLH RLLDWQSDAI DPSRFLESLR CDLADEQILV FTTNGGQHIL PIGATPVDLA YCISASDGDR LIGAYINGHL APLADQLSEG DLVEPITADA ASGYPGPSKE WLLSAKTPQA QLLISQWFAG YRGPHATESA RTVGGQRTLT DRIEAGHLAV NAALRRRDRG LASTEPLLRL ALDLGYPDLD ALYLAVYDKK LDAGELADKL IASVDREPEP ETLPSH
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