Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4357 |
Symbol | |
ID | 8885558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 4642040 |
End bp | 4643554 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | |
Product | TAP domain-containing protein |
Protein accession | YP_003513097 |
Protein GI | 291301819 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00619924 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.129935 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGAACCC CCTCACGCAA ATGGACGGTC GCGGCCGCGG CCGTCGTCGC CCTCACCGCC GGGACCCTGG TGTCCTGGCA GGCCAACGCC GAACCCGACG CGGCGGCCCT GGACTGGAAA CCCTGTTCGG AGGACGGGAA GGTCGACTGC GCCACCGTCG CCGTCCCGCT CGACTGGTCC GACCCGAACG GCGAGACCAT CGACATAGGA CTCGCACGTC GTAGGGCCAC CAACCCCGAC GAGCGGATCG GCTCGATCCT CATGGACCCG GGCGGACCCG GCGGTTCCGG CGTCCAGCTG GTCAAGGACG GCGGCGTGTT CACCGGCGCC GTCGACGAAC GCTTCGACAC CATCGGCTTC GACCCGCGCG GCGTGAACAC CAGCACCCAG GTCAAGTGCG ACCCCGAACT CACCCAGACC GCCCGCGCGG CGATGGACCC GCGAACCCCC AAGGAGTACG AGCGGACCGT CGAGCTGTCG GGCGAACTGG CCGCCGACTG CCGGGAGAAG ACTGGCCCGC TGTACGACCA CGTCTCCAAT CTGGACGTCG TGAAGGACAT GGAGGCGATC CGGGTCGCGC TGGGCGAGGG CAAGCTGAAC TTCGTCGGCT ACTCGTACGG AACCCTTATG GGACAGCAGT ACGCGGAGGC GTACCCGGAC AAGATCCGGG CCATGGTCAT GGACGGCAAC ATGGACCACA GCATCACCTC CACGTACAAG CACATGGCCA CCCAGGTCAA GGCGGCCGAG GACATCTTCG TCGAGTTCGC CGACTGGTGC GACACCGACG CGAAGTGCGC CCTCAACGGG ATGGACACCC GCAAGGTCTA CGGCGAGCTG CGGGACAAGG CCAAGGCGGG CGAGCTGACC GATCCGTCCA CTGGCGACAA GATCGACTTC AACACCTTCT CCAGCTTCAT ACCCCGCAAC GCGCGGCCCA ACAACTGGGC GGGGTTGGCC GACAACCTCA AGGCGCTGTA CGAGGGCAAG GGCAAGGTGG CCAAGACCAT GGTGAAGGCC GAGCCGATCA ACCTGCCGGT GCAGGCCATG TGGTGCCAGG ACTGGGATCT GCCCGTGGGC GGTTTCGGTG AGTGGACCAA GTTGCGCAAG AAGCTAGCCA AGAAGTACCC CAACACCCAG TGGACGTCCA ATCTGGACAA CTCGCTGATG TGCGAGGGCT ACCCCGGCGA GACCACCAAC CCGCAAGAGC GGCTTGACAT CGACGACGCC CCGCCGCTGG TGATGCTGGG CAACCTCCAC GACCCGGCGA CGGTGTACTC GTGGTCGAAG GCCGCCGCGA AGCAGAGCGG CGCCTCGCTG ATCACCTACG AGGGGTTCGG GCACACGATT TACGCCTACG GCCGTAAGAG CGAGTGTGTC AACGACGCCG TGGACGACTA CCTGATCGAT CTGAAGGTGC CGCAGGACGG ACTGCGCTGC CCAGCGCTGG AGAAGCCCGG GGCGAGCGGG AAGACCTTGG ACGCGCCGTT CGACGACAGT CTCGACTACA ACTGA
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Protein sequence | MRTPSRKWTV AAAAVVALTA GTLVSWQANA EPDAAALDWK PCSEDGKVDC ATVAVPLDWS DPNGETIDIG LARRRATNPD ERIGSILMDP GGPGGSGVQL VKDGGVFTGA VDERFDTIGF DPRGVNTSTQ VKCDPELTQT ARAAMDPRTP KEYERTVELS GELAADCREK TGPLYDHVSN LDVVKDMEAI RVALGEGKLN FVGYSYGTLM GQQYAEAYPD KIRAMVMDGN MDHSITSTYK HMATQVKAAE DIFVEFADWC DTDAKCALNG MDTRKVYGEL RDKAKAGELT DPSTGDKIDF NTFSSFIPRN ARPNNWAGLA DNLKALYEGK GKVAKTMVKA EPINLPVQAM WCQDWDLPVG GFGEWTKLRK KLAKKYPNTQ WTSNLDNSLM CEGYPGETTN PQERLDIDDA PPLVMLGNLH DPATVYSWSK AAAKQSGASL ITYEGFGHTI YAYGRKSECV NDAVDDYLID LKVPQDGLRC PALEKPGASG KTLDAPFDDS LDYN
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