Gene Snas_4280 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4280 
Symbol 
ID8885481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4571752 
End bp4573089 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content69% 
IMG OID 
Productbeta-galactosidase 
Protein accessionYP_003513022 
Protein GI291301744 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0714025 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones47 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCCA TGCCCCGATT CCCCGACGGC TTCCACTGGG GAGTGGCCAC CTCGGCGTTC 
CAGATCGAGG GGGCGCTCGA CGCCGACGGC CGGGGCCGCT CGGTCTGGGA CACCTTCACC
GCCACTCCCG GCAAGATCCG CGACGGCCAC ACCGCCGCGA CCGCCTGCGA CCACTACCGT
CGCTTCGGCG AGGACATCGA CCTGATGCGG CGCCTGGGCA TCGACGTCTA CCGGTTCTCG
ATCGCCTGGC CCCGGGTGTT CCCCGACGGC CACGGCAAGG TCAACACCGC CGGGCTCGAC
TTCTACGACC GCCTCGTCGA CGCGCTTCTG GCCGCGAACC TCACCCCGAT GCCCACCCTG
TTCCACTGGG ACCTCCCACA ATCCCTTGAG GACGCCGGTG GTTGGCTGAA CCGCGACACC
GCCGCCCACT TCGCCGACTA CGCCTCAACA GTCGCCCAGC GGCTCGGCGA CCGGGTGAAC
GACTGGATCA CCCTCAATGA ACCCTTCGAG CACATGGCGC TCGGCTACGC GCTGGGCCAG
CACGCCCCCG GTCACATGAT GCTGCTGGAG AGCCTGCCGG TGGCGCACCA CCAACTGCTC
GGGCACGGCC TGGCCACAGC GAGGTTGCGC GCCGCCGGAG CGAAGCGGGT GCTGCTGACC
AACAGCTACA CCCCCGTCGA ACCCGCCACC GCCTCCGAGG CCGACGCGGC CGCCGCTGCC
GCCTACGACG CCCTGCACCG CGGCCTGTTC ACCGATCCGG TGGTGCTGGG CCGCTACCCG
GACCTGTCGG CCTTCGGCGC CGACGAGCTG CCGTTCGTCC ACGATGATGA CCTCGACGTC
ATCGCCACCC CATTGGACGG TCTGGGCGTC AACTACTACG CCCCCACCAA ACTCGCCGCC
GCCGTCGACG GGCCGCTGCC CTTCACGATG ACCGAGTACC CCGACGCCGA CAAGACCGCA
TTCGACTGGC CGGTCGTCCC CGACGGGATG CGCCGGATCC TGGTGGAGTT GACCGAACGC
TACGGCGACG CGCTGCCGCC GCTGTGGGTC ACCGAGAACG GCTGCTCCTT TCCCGACGGT
CCCGGCGACG ACGGCGCCGT CCACGACGAC CGACGTATCT CCTACCTGGA CTCCCACATC
CGCGCCGTGC ACGATGCCAT CGAGCAGGGA GCCGACGTGC GCGGGTACCT GACCTGGACG
CTGTGCGACA ACTTCGAATG GGCCGAGGGC TACCACCAGC GCTTCGGTCT GGTGCATGTG
GACCATGACA CCCAGAAGCG CACCCCCAAG GACTCCTTCG CCTGGTTCGC CGGGATGCTC
GCGGAGCAAC GCGCATGA
 
Protein sequence
MTAMPRFPDG FHWGVATSAF QIEGALDADG RGRSVWDTFT ATPGKIRDGH TAATACDHYR 
RFGEDIDLMR RLGIDVYRFS IAWPRVFPDG HGKVNTAGLD FYDRLVDALL AANLTPMPTL
FHWDLPQSLE DAGGWLNRDT AAHFADYAST VAQRLGDRVN DWITLNEPFE HMALGYALGQ
HAPGHMMLLE SLPVAHHQLL GHGLATARLR AAGAKRVLLT NSYTPVEPAT ASEADAAAAA
AYDALHRGLF TDPVVLGRYP DLSAFGADEL PFVHDDDLDV IATPLDGLGV NYYAPTKLAA
AVDGPLPFTM TEYPDADKTA FDWPVVPDGM RRILVELTER YGDALPPLWV TENGCSFPDG
PGDDGAVHDD RRISYLDSHI RAVHDAIEQG ADVRGYLTWT LCDNFEWAEG YHQRFGLVHV
DHDTQKRTPK DSFAWFAGML AEQRA