| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4272 |
|---|
| Symbol | |
|---|
| ID | 8885473 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 4564371 |
|---|
| End bp | 4566077 |
|---|
| Gene Length | 1707 bp |
|---|
| Protein Length | 568 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_003513014 |
|---|
| Protein GI | 291301736 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAAG CACCATCCGA ACTGGGCGCC CCTCCGCCGT TGGCCGCCGG GGCCTTGCGG
GTGACACCCT TGGGTGGGCT TGGCGCCATC GGGCGCAACA TGACGGCCTT CGAGTTCGAC
GGACGCATCC TCATCGTCGA CTGTGGTGTG TTGTTCCCGG ACATGGACCA GCCCGGGGTC
GACCTGATCC TGCCCGACTT CACCAGCCTG CTGGACCGGC TGGACGACAT CGAGGCGATC
GTCCTCACCC ACGGACACGA AGACCACATT GGAGCGGTTC CGTACCTGCT GGCCCACAAG
CCGGACATTC CGCTGGTGGG TTCCCAGTTC ACGCTGGCCC TCATCGAGGC GAAACTGCGG
GAACGCAAGA TCAAGCCCTA CACCCTGTCC GTCGAGGAGG GTGGCAGCGA ACAGCTGGGG
CCGTTCGGCT GCGAGTTCTT CGCCGTCAAC CACTCCATCC CCGACGCGCT GGCGGTGGCC
ATCCGCACCG AGGCGGGGCT GGTCCTGCAC ACCGGCGACT TCAAGATGGA CCAGCTGCCG
CTGGACGGCC GGGTCACCGA CCTGGCCGGG TTCGCCAGCC TCGGCGAACA GGGCGTCGAC
CTGCTGCTGT CGGACTCCAC CAACGCCGAG ATCCCCGGCT TCGTCACCTC CGAGCGGGAG
ATCCGCCCGG TGCTGGACGA CATCTTCCGC AACGCCGCCG GGCGCATCAT CGTGGCGTCG
TTCGCCTCGC ACGTGCACCG GGTGCAGCAG GTCTTCGACT CGGCGGTCGA GCACGGCCGC
AAGGTCGCCT TCATCGGACG CTCCATGGTG CGCAACATGG GCATCGCCCG CGACCTGGGG
CTGCTGCGCA TCCCCGGCGG CACCCTGGTG TCCATGGACG AGGCCACCCG GCTGCCCGAC
GACGAGATCG TCTACATGTC CACCGGTTCG CAGGGTGAAC CGATGAGCGC CCTGGGCCGG
ATGGCCTCCG GCGACCACCG GCACATCACC GTCGAGTCCG GGGACACCGT CGTGCTGGCG
TCGTCGCTGG TGCCCGGCAA CGAGACCGCC GTGTACGGCG TCATCAACCG GCTGTCGCGC
TCGGGCGCCA CCGTCATCCA CAAGGACGTC GCCAAGGTCC ACGTGTCCGG GCACTCCCCG
GCCGGGGAAC TGCTGTACGT CCTCAACGTG GTCAAGCCCT CGAACTTCAT GCCCGTCCAC
GGCGAATGGC GGCACCTGCG CGCCCACGCG CGGCTGGGAA TCCAGTCCGG GGTGCCCTCC
GACCAGGTGG TGCTGGCCGA GAACGGCGAC GTCGTGGACC TGGTGAACGG CATCGCCCGG
GTGGTCGGCC ACATCGAGAA CAACAACATC TATGTGGACG GACTGGCCGT CGGCGACGTC
GGCGAACCGG TCCTGACCGA ACGCCGCATC CTCGGCGACG GCGGATTCGT GTCCTGCACG
GTCGTCGTCG ACTCCGTCAC CGGCAAGGTC GTCGGCGGGC CCACCGTGTC GGCCAAGGGC
TTCAGCGAGG ACCAGACCGC GTTCAACGCG GTGCTGCCGC TGATCACCGA GGCGCTCGAC
AAGGCCGCCG CCGACGGCGT CTCCGACCCG CACCAGTTGC AGCAGCTGGT GCGCCGCACC
GTCGGCAAAT GGGTCAACGA CACCTACCGC AGGCGCCCGA TGATCGTGCC GCACGTACTG
GAGGTCTTAG GTCCCCGCGG GGGATGA
|
|---|
| Protein sequence | MNKAPSELGA PPPLAAGALR VTPLGGLGAI GRNMTAFEFD GRILIVDCGV LFPDMDQPGV
DLILPDFTSL LDRLDDIEAI VLTHGHEDHI GAVPYLLAHK PDIPLVGSQF TLALIEAKLR
ERKIKPYTLS VEEGGSEQLG PFGCEFFAVN HSIPDALAVA IRTEAGLVLH TGDFKMDQLP
LDGRVTDLAG FASLGEQGVD LLLSDSTNAE IPGFVTSERE IRPVLDDIFR NAAGRIIVAS
FASHVHRVQQ VFDSAVEHGR KVAFIGRSMV RNMGIARDLG LLRIPGGTLV SMDEATRLPD
DEIVYMSTGS QGEPMSALGR MASGDHRHIT VESGDTVVLA SSLVPGNETA VYGVINRLSR
SGATVIHKDV AKVHVSGHSP AGELLYVLNV VKPSNFMPVH GEWRHLRAHA RLGIQSGVPS
DQVVLAENGD VVDLVNGIAR VVGHIENNNI YVDGLAVGDV GEPVLTERRI LGDGGFVSCT
VVVDSVTGKV VGGPTVSAKG FSEDQTAFNA VLPLITEALD KAAADGVSDP HQLQQLVRRT
VGKWVNDTYR RRPMIVPHVL EVLGPRGG
|
|---|
| |