Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4270 |
Symbol | |
ID | 8885471 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 4561354 |
End bp | 4563120 |
Gene Length | 1767 bp |
Protein Length | 588 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | 5'-Nucleotidase domain-containing protein |
Protein accession | YP_003513012 |
Protein GI | 291301734 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCAAGC GGACGAAGCG CGTGCTCGTC GGTGCGACCG CTGCGAGCCT GGTGCTCGGG ATCGGCCTCG TGGCCGGACC GAACGCCTTC GCCGCCGGCG ACGACACCAC CGACATCCAG TTGCTGGCCA TCAACGACTT CCACGGCGCT CTCGAACCGC CGACCGGCTC GTCGGGGAAA CTGACCGAAC TGGACGAAGA GGGCAACGAG CACACCGTCG AGGCCGGAGG CGCCGCCTAC CTGGCCACCC ACCTGAAGCA GGCCCGCAAG GGACACGACA ACTCCACCAC CGTCGCCGCC GGTGACCTGA TCGGCGCCAG CCCCTTCACC TCGGCGGCCT TCCACGACGA ACCCACCATC GAGTCGATGA ACAAGCTGGG CCTGGACGTG TCCTCGGTCG GCAACCACGA GTTCGACGAG GGCCTGGCCG AACTCAACCG GATGCGCGAG GGTGGCTGCC ACCCCGACGA CGGCTGCACC GACGAGGACA AGCCCTTCAA AGGCGCCGAC TTCAAGTACC TGGGCGCCAA CGTCGTCGAC AAGGAAAGCC AGGAACCCGA ACTGCCCCCG GTGTGGGTCA AGGAGTACGA CGACGGCGCC AAGGTCGGCT TCATCGGCAT GACCCTCGAG GGCACCGGCG ACATCATCAC CAAGGACGGC AACGAGACCA TCGAGTTCAA GGACGAGGTC AAGACCGCCA ACTTCTACGC CAAGATCCTC GAGTACATGG GCGTCAACGC GATCGTGACG CTGCTGCACG AGGGCGGCAT GCCCGAGTCC GGCGCCTACA ACTACGACTG CAACTCGCCC GGCCCCGGCG ACGGCATCTC CGGACCCGTC GTCGACATCG CCAAGGGCCT GTCGCCCAAG ATCGACGCCG TCGTCACCGG CCACACCCAC CAGGCCTACG ACTGCAACAT CAAGGACCCG AAGGGCAACG ACCGCCTGGT CACCTCCGGC TCGTCCAACG GCCGTCTCTT CACCGAGATC AACATGAAGT ACGACTTCGA GTCCGACGAC CTGGAGCGCA CCTCCATCGA GGCCACCAAC CGCGCCGTGA CCCGCGACGT CAAGAAGGAC AAGAAGCAGA CCAAGCTCAT CGACAAGTAC AAGAAGCTGG CCGAACCCAT CGCCAACAAG AAGGTCGGCT ACATCTCCGA GGACATCACC CGGGGCGACT CCGAGGCCCG CGAATCGGCG CTGGGAGACC TGATCGCCGA CGCGCAGCTG GAAGCCACCT CCGGTGACAA CGGCACGTCG CAGATAGCGT TCATGAACCC CGGCGGCATC CGCACCGACC TGGTACACAA ACAGTCCGGG TCCGAAGGCG ACGGTGTCGT CACCCACGGC GAGGCGTTCT CGGTGCAGCC CTTCGCCAAC TACCTGACCG CGATGGACCT CACCGGCGAA CAGATCATCA CGCTGCTGCA ACAGCAGTAC AGTGGGGCCA ACGAGGGTGA GCCGCAGGTG CTGCAGGTGT CCAAGGGCTT CACCTACACC GTGAAGGAGT CCAACTCGGG CGCCGACAGG GTGGTCGTCG ACAGCGTCAA GCTCAACGAC GAGAAGCTCG ACCCGTCCAA GACCTACCGG GTCACCGTCA ACAGCTTCCT GGCCGGAGGC GGCGACGGTT TCAAGGTACT CACCGAGGGC AAGAACGTCG AGGTTGGACA GGACGACCTC GCCGCACTGG AGAAGTGGTT CGCCGACAAC ACGTCGGAAT CCAAGCCCGC CGACGCGCCG GCGGCCGACC GGATCACCTT CGAATAG
|
Protein sequence | MSKRTKRVLV GATAASLVLG IGLVAGPNAF AAGDDTTDIQ LLAINDFHGA LEPPTGSSGK LTELDEEGNE HTVEAGGAAY LATHLKQARK GHDNSTTVAA GDLIGASPFT SAAFHDEPTI ESMNKLGLDV SSVGNHEFDE GLAELNRMRE GGCHPDDGCT DEDKPFKGAD FKYLGANVVD KESQEPELPP VWVKEYDDGA KVGFIGMTLE GTGDIITKDG NETIEFKDEV KTANFYAKIL EYMGVNAIVT LLHEGGMPES GAYNYDCNSP GPGDGISGPV VDIAKGLSPK IDAVVTGHTH QAYDCNIKDP KGNDRLVTSG SSNGRLFTEI NMKYDFESDD LERTSIEATN RAVTRDVKKD KKQTKLIDKY KKLAEPIANK KVGYISEDIT RGDSEARESA LGDLIADAQL EATSGDNGTS QIAFMNPGGI RTDLVHKQSG SEGDGVVTHG EAFSVQPFAN YLTAMDLTGE QIITLLQQQY SGANEGEPQV LQVSKGFTYT VKESNSGADR VVVDSVKLND EKLDPSKTYR VTVNSFLAGG GDGFKVLTEG KNVEVGQDDL AALEKWFADN TSESKPADAP AADRITFE
|
| |