| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4247 |
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| Symbol | |
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| ID | 8885448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 4541719 |
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| End bp | 4542951 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | |
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| Product | helix-turn-helix domain-containing protein |
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| Protein accession | YP_003512989 |
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| Protein GI | 291301711 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.710263 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCACCT CGCACTGTGA TGTATACGAC TTGCGATCGG TCACATCCTG TCACACAGAA
TCAAGAAACG CAATGTGCGT CTTTCGTTTG GGCGTGGTTA GATTTTCGTA CTGTGAGTTG
ATGCGGCACA ATGAGCGCAT GACAGCACGT AAGAGCCTGA CCGTTCGCAA GCGTCGCTTG
GTGCGCGCGC TTCGTCAGCT CCGCAAGGAT TCCGGCATCA CTCTTGAGAA AGCGGCCGAA
CATCTGGACA TCAACCACAC CAGCCTGTCG AGGATTGAGA CCGGCGTCGC AGCCGTGAAA
CTGCCGTACG TTGAATCTTT GCTGCGGCTG TACGGGGTGC CCGAAGCCCG ACAAGAAGAG
CTACTACAGC TCACGCGAGA GGCAAAGCAA CGGGGCTGGT GGCAGGCATA CAAGGACATC
CTGTCCAGCG AGTATGCGGA CTTCATTGGG TTTGAGACAG AGGCGAACGA AACCCGAACG
TACGAACTTG ACACCGTCCC CGGTCTCCTA GAGACCGAAG ACTACGCTCG GGCGTTGATT
TCGGCGCAGC TTCCCGGCGC GACGGCGGAA GACATCGAAA AGCGGGTGAA GTTGAGGGCG
AGCCGTCAAG ATCGGCTCAA AGAAGACCCG AAACTCAGCG TTTGGGCCAT CCTCGGAGAA
GCTGCGCTGC GATATCAGGT CGGCGGAATG AAAGTTCTAC GGGCACAGCT TGAATATCTA
CTGCAACTTC AGCGCGAGCC CAACATCACG ATTCAAGTTC TCCCGTTTTC CGCAGGTGCG
CACCCTGGGA TGGCTGGTCC GTTCGTAATC CTCGGGTTTG ACGACGATCC TGACATCGTT
TACCTCGAAG GGCTCACCAG CGCGCTTTAT CTCGAAGATC TTGGCGAGTT GGAGCGCTAT
AAGATGGTTT TCGAGCGTCT TCTCGCCGAG GCTTTGAGCC CTGCGGCGTC CGACAGGCTC
ATTCGAGAGG CATCAAAAGA GTTATGCCAC TTTGCAAACA ACGGAAGGAG GCGCGGGATG
GCCGCGCAAG GTGACGACCT GGCCCGTGCC CGATGGCGCA AGGGCAGACG AACCCAAGCC
AACGGCAACT GCGTGGAGGT TGCCCTAGTC GAGTCAGTCT ACGTGCGTGA CTCCAAGCTC
GACACTACAG GAACGTTCCC CACACTCTCA GTCTCAAGTA CCGAGTGGAA GAACTTTCTT
CTTGCAATCG CCAACAACGA CAAGACCGGC TAA
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| Protein sequence | MVTSHCDVYD LRSVTSCHTE SRNAMCVFRL GVVRFSYCEL MRHNERMTAR KSLTVRKRRL
VRALRQLRKD SGITLEKAAE HLDINHTSLS RIETGVAAVK LPYVESLLRL YGVPEARQEE
LLQLTREAKQ RGWWQAYKDI LSSEYADFIG FETEANETRT YELDTVPGLL ETEDYARALI
SAQLPGATAE DIEKRVKLRA SRQDRLKEDP KLSVWAILGE AALRYQVGGM KVLRAQLEYL
LQLQREPNIT IQVLPFSAGA HPGMAGPFVI LGFDDDPDIV YLEGLTSALY LEDLGELERY
KMVFERLLAE ALSPAASDRL IREASKELCH FANNGRRRGM AAQGDDLARA RWRKGRRTQA
NGNCVEVALV ESVYVRDSKL DTTGTFPTLS VSSTEWKNFL LAIANNDKTG
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