Gene Snas_4199 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4199 
Symbol 
ID8885400 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4497126 
End bp4498511 
Gene Length1386 bp 
Protein Length461 aa 
Translation table11 
GC content68% 
IMG OID 
Productdihydrolipoamide dehydrogenase 
Protein accessionYP_003512942 
Protein GI291301664 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0596689 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0231786 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGACC CGAACGCGGG CTACGACGTC GTAATCCTGG GTAGCGGCAG CGCCGGTTAT 
GCCTGCGCCC TGCGGGCAGC CCAACTCGAC TTGAGCGTCG CCATCATCGA GAAGGACAAG
CTGGGGGGCA CCTGCCTGCA CACCGGCTGC ATACCGACCA AGGCGCTGCT GCACGCCGGC
GAGGTCGCCG ACTCGGCCCG GCACGGCGAG GAGTTCGGGG TCAAGACCGA GGGCGTCTCC
ATCGACATGG CCGGTGTCAA CGCCTACAAG GACGGCGTGG TCGCCAAGAT GTACAAGGGC
CTGCAGGGCC TCATCAAGGC CAGCAAGGTC ACCGTCATCG AGGGCTCCGG CAAGCTGGTC
GGCCCCAACA CCGTCGAGGT CAACGGGGAA CGCGTCACCG GACGCAACAT CGTGCTGGCC
ACCGGCTCGT ACTCCAAGTC GCTGCCCGGC CTCGACGTCG ACGGCACCAA GGTGATCACC
TCCGAGCACG CGCTCCGCCT CGACAAGGTT CCCTCCAGCG CCATCGTGCT GGGCGGCGGC
GTCATCGGCG TCGAGTTCGC CAGCGCCTGG AAGTCGCTGG GCGCCGATGT CACCATTGTG
GAGGCTCTGC CCCGTCTGGT GGCCGCCGAG GACGCCGACT CGTCGAAGAT GCTGGAGCGG
GCCTTCCGCA AGCGCGGCAT CAAGTTCAAG ACCGGCAAGG GCTTCGAGTC GCTCAAGGAG
ACCGCCGGGG GCGTGTCGGT CACGATCGCG GGCGGCGAGA CCATCGACGC CGAGCTGCTG
CTGGTGGCCG TCGGCCGCGG CCCCTCCACC GCCGGCCTGG GCTACGACGA GCAGGGCGTG
TCCATGGACC GCGGCTTCGT CCTGGTCAAC GAGCACCTGC AGACCAACCT GCCGGGCGTG
TACGCCATCG GCGACATCGT CCCGGGTGTG CAGCTGGCGC ACCGCGGCTT CGGGCACGGC
ATCTTCGTCG CCGAGCACAT CGCGGGCCTG AACCCGCGTC CCATCGACGA GGCCGGGATC
CCGAAGGTGA CCTACAGCGA GCCGCAGGTG GCCTCGGTGG GCTACTCCGA GGAAGCCGCC
AAGGAGAAGT TCGGCGCCGA CGTCGTGGTG TCGTACAACT ACAACCTCGG CGGCAACGGC
AAGAGCAACA TCCTCAAGAC CCAGGGCTTC GTCAAGCTCG TCAGCGTCAA GGACGGACCG
GTCGTGGGTG TCCACATGGT CGGCGCCAAC ATGGGTGAGC AGATCGGTGA GGCGCAGCTG
ATCTACAACT GGGAGGCCTT CCCGTCGGAC GTCGCCCAGC TGATCCACAT GCACCCGACC
CAGAACGAGG CTCTCGGCGA GGCGCACCTG GCTCTCGCGG GCAAGCCACT GCACGCACAC
GCCTAA
 
Protein sequence
MSDPNAGYDV VILGSGSAGY ACALRAAQLD LSVAIIEKDK LGGTCLHTGC IPTKALLHAG 
EVADSARHGE EFGVKTEGVS IDMAGVNAYK DGVVAKMYKG LQGLIKASKV TVIEGSGKLV
GPNTVEVNGE RVTGRNIVLA TGSYSKSLPG LDVDGTKVIT SEHALRLDKV PSSAIVLGGG
VIGVEFASAW KSLGADVTIV EALPRLVAAE DADSSKMLER AFRKRGIKFK TGKGFESLKE
TAGGVSVTIA GGETIDAELL LVAVGRGPST AGLGYDEQGV SMDRGFVLVN EHLQTNLPGV
YAIGDIVPGV QLAHRGFGHG IFVAEHIAGL NPRPIDEAGI PKVTYSEPQV ASVGYSEEAA
KEKFGADVVV SYNYNLGGNG KSNILKTQGF VKLVSVKDGP VVGVHMVGAN MGEQIGEAQL
IYNWEAFPSD VAQLIHMHPT QNEALGEAHL ALAGKPLHAH A