Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_4188 |
Symbol | |
ID | 8885389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 4485543 |
End bp | 4486193 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | Lysine exporter protein (LYSE/YGGA) |
Protein accession | YP_003512931 |
Protein GI | 291301653 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.34113 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0417151 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCTTG GTGTCACCGA CCTGTGGACC TACGTCATCG CCACCGTCCT GGTGATCCTG CTGCCCGGAC CCAACTCGCT GTACGTGCTG TCGGTCGCCG CCCGCAAGGG CGTCCGCGAC GGCTACCGCG CCGCCGCGGC GGTCTTCGTC GGCGACTCCG TGCTCATGAT CGCCTCGGCC GCCGGGGTGG CCTCGCTGCT GCAGACCTCA CCGGTGCTGT TCACGATCGT CAAGTACGCC GGGGCCATCT ACCTGGCCTA CCTGGGCGTC ATGCTGATCC GTTCGGGCAT CAAGACCTGG CGGGCCCGCA GGACCGACGA CGCCGACGCA CCCGCCGAGA CCACCAACCT GGAACGTCCG TTCAGGCGCG CGTTCATCGC CAGCCTGCTC AACCCGAAGG CGATCCTGTT CTTCGTGGCG TTCTTCGTCC AGTTCGTCGA CCCCGCCTAC CCCTACCCGG CGCTGAGCTT CCTGCTGCTG GGAGCGATCG TCCAGGTCTG CAGCCTCACC TACCTGAGCG TGCTGATCTT CAGCGGCAAC GCCCTGGCCA GCGCGTTCCG CCGCCGCCGT CGACTGTCCT CACTGGGCAC CGGCGGCATC GGGGCGGTCA TGCTCGGCTT CGCCGCGAAA CTGTCCACCG CGAGTATGTG A
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Protein sequence | MLLGVTDLWT YVIATVLVIL LPGPNSLYVL SVAARKGVRD GYRAAAAVFV GDSVLMIASA AGVASLLQTS PVLFTIVKYA GAIYLAYLGV MLIRSGIKTW RARRTDDADA PAETTNLERP FRRAFIASLL NPKAILFFVA FFVQFVDPAY PYPALSFLLL GAIVQVCSLT YLSVLIFSGN ALASAFRRRR RLSSLGTGGI GAVMLGFAAK LSTASM
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