Gene Snas_4188 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4188 
Symbol 
ID8885389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4485543 
End bp4486193 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content68% 
IMG OID 
ProductLysine exporter protein (LYSE/YGGA) 
Protein accessionYP_003512931 
Protein GI291301653 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.34113 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.0417151 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTTG GTGTCACCGA CCTGTGGACC TACGTCATCG CCACCGTCCT GGTGATCCTG 
CTGCCCGGAC CCAACTCGCT GTACGTGCTG TCGGTCGCCG CCCGCAAGGG CGTCCGCGAC
GGCTACCGCG CCGCCGCGGC GGTCTTCGTC GGCGACTCCG TGCTCATGAT CGCCTCGGCC
GCCGGGGTGG CCTCGCTGCT GCAGACCTCA CCGGTGCTGT TCACGATCGT CAAGTACGCC
GGGGCCATCT ACCTGGCCTA CCTGGGCGTC ATGCTGATCC GTTCGGGCAT CAAGACCTGG
CGGGCCCGCA GGACCGACGA CGCCGACGCA CCCGCCGAGA CCACCAACCT GGAACGTCCG
TTCAGGCGCG CGTTCATCGC CAGCCTGCTC AACCCGAAGG CGATCCTGTT CTTCGTGGCG
TTCTTCGTCC AGTTCGTCGA CCCCGCCTAC CCCTACCCGG CGCTGAGCTT CCTGCTGCTG
GGAGCGATCG TCCAGGTCTG CAGCCTCACC TACCTGAGCG TGCTGATCTT CAGCGGCAAC
GCCCTGGCCA GCGCGTTCCG CCGCCGCCGT CGACTGTCCT CACTGGGCAC CGGCGGCATC
GGGGCGGTCA TGCTCGGCTT CGCCGCGAAA CTGTCCACCG CGAGTATGTG A
 
Protein sequence
MLLGVTDLWT YVIATVLVIL LPGPNSLYVL SVAARKGVRD GYRAAAAVFV GDSVLMIASA 
AGVASLLQTS PVLFTIVKYA GAIYLAYLGV MLIRSGIKTW RARRTDDADA PAETTNLERP
FRRAFIASLL NPKAILFFVA FFVQFVDPAY PYPALSFLLL GAIVQVCSLT YLSVLIFSGN
ALASAFRRRR RLSSLGTGGI GAVMLGFAAK LSTASM