| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4139 |
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| Symbol | |
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| ID | 8885340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 4426906 |
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| End bp | 4429857 |
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| Gene Length | 2952 bp |
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| Protein Length | 983 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003512883 |
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| Protein GI | 291301605 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.180514 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGACTTTC GGGTTCTTGG CCCACTGGAA GTGACGAGAG CTGAGTCTCG TGTCGACGTG
CGAGGCCGCA TCGGGAAGCG GCTACTGGCG GTGCTTCTGA TTGATGCCGG ACACGGTGTC
TCCATGGCCC GCCTCATCGA GGGCATATGG GACGGTGATC CACCGGAAAC GGCGCTTCGC
CAAGTCAGAC ACGCCGCTTC TCGGCTGCGA AAAGTCTTGG GGGCTGAGCG CTTGGAATCG
GCCGGGGACG GTTATCGCCT CAATATGGAT GGCGCCACCT GCGACGCGAT TCTCTTCGAA
CAGAAGGTAC GTGAAGCCCG TGAACTGTTC CTGCGGCGGG ACAACGCGCA GCGGCTAGCG
GTCTTGCGCA CGGCACTCGG ATTGTGGCAG GGCAGCGCGT ACAGCGGCCT GGAAGGCAGG
CTCATCAACA CCGAGGTAGC CAGGCTCGGA GGAATATGGC TGGCCGCGCT GGAGGAACGC
CTCGACGCCG AACTCGCACA CGGCGACCAT TCGCAGGTGA TCGGTGAGCT TCGGCTGCTG
GTCCTGGAAC ACCCGTTCCG GCAACGCTTG ACCGACTTGC TGATGCTGGC GCTGTATCGA
GACGGCAGGA CACCTGAGGC ACTCGAAGCG TACGAGCGTT TGCGGACAGA CCTCGCCGAG
AACCTGGGCC TCGATCCGGA CGTCTCGTTG CGGGAAAGAC ACGCTGCGAT ACTGCGACGC
GATCCGGTAC TGGACCTGTC CGACAACGCC TCGACTCGTC CGGACCGGCC CGTGCGGCCG
TCGTATGTTC AGCCCGGAAA GTCCGTGCCC GCTCAACTGC CGATCAAACC CGCGGGATTT
GTCGGACGCA ACATCGCGCT TACGGCATTG ACCAGGCAGT TTCACGACAG CGACAAGTCT
CGTTCCTGTG TGGTTGTTGG AGCCGCCGGG GTCGGCAAGA CCGCTCTGGC CATTCACTGG
GCACATGAGA ACCGCGACCA GTTCCCCGAC GGGCAGTTCT TCATCAATCT GCGCGGATTC
GATTCCGGTG CCCCCGTCTC GGCACATGAA GCACTCGGCC GTTTCATCCG AGCGCTGCGG
GATCCGAGCG TTTCGATACC ATCCGATGTC GACGAAGCGG CAGCCTTGTA TCGGTCATTG
ACCGACGGAA AACGCATACT GGTCGTACTC GACAATGCCA AGAACGCCGA CCAGATTCGA
CCTCTCATAC CGTCGTCGCC GAACGCCTTC ACGGTTGCCA CCAGCCGAAA TCGGCTCACA
GGACTCACCG CCGTTGATGA CACGGTGCCG CTTTTCCTTT CGCCCTTGAA TCACCTTGAG
TCCGTCGATC TTCTGGCCAA ATCCGCGAGT ACGGCTGGCT TGAGCATCGA CCGTGGCTCC
ACGCGTCGTA TTGCCGAACT TTGTGGACAT CTGCCGTTGG CGTTGCGGAT CTCGGCCGCG
CTACTCGTGG ATGGCTCGGG ACGCACCGCC AAGCAGTTGG CCGATGAACT CGGCAACCCG
GACCGCCTTG ACCTGCTTTC CGTCGACGGC GACTCGACGA TTGCCACTGC CCTGGACCAG
TCTTTCCAGA GTTTGACAGC AGAAGCCCAA CAGCTGCTGT GCCAGCTCGC TCTCATCCCC
GGTGATGACT TTCCGCAAGC GTTGGCATTG GAACTGGGCA CTGGCAAGGA CTTCGACCGC
TTGACCACCG CGAGCCTCAT CGATGAGCAT CGCCCAGGTC GATACCGGTT CCATGACCTC
ACCCGCGAGT ACGCCAAGAA AAAGGCTCAA GCGACCGGCA GCGAGATTCA CGTCGCTAAT
CAGGTAATCG GTTGGTACCA CGACAACTGC CGCGTGCTCA ACAGTCACGA CTACAACAAT
GTGATCGCCG CGGTTTCGGC TTGGCGTGCT CACTCAAGCT TTTGGCGTCT GGTTCACACG
GTGGTGGCGT TTGTGCGGTT GGGTGAGAAC ATATCGGTGG CCGCCCCGCT GGTCGATGAC
CAGCTCGCGG CCGCCCTGGA ACGTGGGGAC ACCGAAGCAG CACAAGCCAT GTTTGATGTG
AAGGCGCAGC TGTGCGCCGA AGCGGGTGAC AACCCAGGGG ATGTGAAGTT CGGACAGAAG
GCGTTGGACA TACACCGCGA CGAAACGGGT TTCTACCATT TCACTCACGG AGATGCCCGC
TTCAGCAATG GTGAGATGAC CCTGGCCGAA GACCACTTTC GAACGGCATT GCGGCTAGCC
AACGAGGCGC AACACCAGTA CACGATTCTC GCGAGCACTG CCGCCTTGGC CAATCTTTAC
CGCGTAACAG GTCGCTATGC CGAGGCCGAG ACGCTGTTCG ACGGCGCGCG CAAGTACTTC
GACCACAATC CCACCGGTGC AATGGAAATA GACGCAAGGA TGGCCTTTGT GACCTTCTTG
TGCGAGACGG GGCGTGTTGA TGAAGCCGAA GGATTGCTGC GACCCATCCT TGATTCTGAA
GTGGAGCTGG ACCCCGGTTC GTGGACGCAG GTGATCATGT TCCGCGCTGA TATACGCCAC
GCGCGTGGTC AATACCGTGA GGCGATACAG GATTTTGAAC ATGCCCTGGA ACTGACAGCT
GACAACAGCC GGATACAGTC GCGCCTCATC AGGACCAGCA TCGCCGACAT CTATTGCGAT
CTCGAGGATT ACGACAACGC CCTGAAGCAG TTGGAACTCA TTGACCTGGA CGCCGCGAGT
ACGAAACTGC GCGCCATCGG AATGCTTCAA CTCGCACGTG CCCACAACGG CAAGAAAGAC
CATGCGCGGG CGAAGGCCGC TGCCACCTAC TCGGCGGAGG TCTTCGCCGA GACCAGACTC
CGCTCGCACG CGCTCGCCCT CACAGTCCTC GCGGACGCAC ACGAAGGACT GGGCGAAGTC
AAAACGGCCC GCACAACGCG AGAACGAGCT CTGCGGATAC TGAACGAGCT GGGGCTACCC
GAGCCCGGCT AG
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| Protein sequence | MDFRVLGPLE VTRAESRVDV RGRIGKRLLA VLLIDAGHGV SMARLIEGIW DGDPPETALR
QVRHAASRLR KVLGAERLES AGDGYRLNMD GATCDAILFE QKVREARELF LRRDNAQRLA
VLRTALGLWQ GSAYSGLEGR LINTEVARLG GIWLAALEER LDAELAHGDH SQVIGELRLL
VLEHPFRQRL TDLLMLALYR DGRTPEALEA YERLRTDLAE NLGLDPDVSL RERHAAILRR
DPVLDLSDNA STRPDRPVRP SYVQPGKSVP AQLPIKPAGF VGRNIALTAL TRQFHDSDKS
RSCVVVGAAG VGKTALAIHW AHENRDQFPD GQFFINLRGF DSGAPVSAHE ALGRFIRALR
DPSVSIPSDV DEAAALYRSL TDGKRILVVL DNAKNADQIR PLIPSSPNAF TVATSRNRLT
GLTAVDDTVP LFLSPLNHLE SVDLLAKSAS TAGLSIDRGS TRRIAELCGH LPLALRISAA
LLVDGSGRTA KQLADELGNP DRLDLLSVDG DSTIATALDQ SFQSLTAEAQ QLLCQLALIP
GDDFPQALAL ELGTGKDFDR LTTASLIDEH RPGRYRFHDL TREYAKKKAQ ATGSEIHVAN
QVIGWYHDNC RVLNSHDYNN VIAAVSAWRA HSSFWRLVHT VVAFVRLGEN ISVAAPLVDD
QLAAALERGD TEAAQAMFDV KAQLCAEAGD NPGDVKFGQK ALDIHRDETG FYHFTHGDAR
FSNGEMTLAE DHFRTALRLA NEAQHQYTIL ASTAALANLY RVTGRYAEAE TLFDGARKYF
DHNPTGAMEI DARMAFVTFL CETGRVDEAE GLLRPILDSE VELDPGSWTQ VIMFRADIRH
ARGQYREAIQ DFEHALELTA DNSRIQSRLI RTSIADIYCD LEDYDNALKQ LELIDLDAAS
TKLRAIGMLQ LARAHNGKKD HARAKAAATY SAEVFAETRL RSHALALTVL ADAHEGLGEV
KTARTTRERA LRILNELGLP EPG
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