Gene Snas_4117 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4117 
Symbol 
ID8885318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4388079 
End bp4389677 
Gene Length1599 bp 
Protein Length532 aa 
Translation table11 
GC content65% 
IMG OID 
ProductCytochrome b/b6 domain-containing protein 
Protein accessionYP_003512861 
Protein GI291301583 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.358172 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCC GCAAGTTCGA CATGAAGCAG CTGCCCGGCA AGGTCGGCAA CGAACTGGAC 
GACCGGTTCA AGCTGGCCTC CCCGGCGCGC AAGCTGATGA CCAAGGTCTT CCCCGACCAC
TGGTCGTTCC TGCTGGGCGA GATCGCGCTG TTCTCGTTCA TCGTGCTGCT GCTGACCGGT
ACCTTCCTGG CACTGTTCTT CGAGCCGTCG ATGGTCGAGG TCAAGTACGA CGGCGTCTAC
ACGCCGCTCA AGGGCATGGA GATGTCCAAG GCCTACGAGT CGACGCTGCA CATCTCCTTC
GAGGTGCGCG GCGGTCTGGT CATCCGGCAG ATGCACCACT GGGCCGCGCT GCTGTTCGTG
GCCGCGCTCT TGGTCCACAT GGGCCGGGTG TTCTTCTCCG GCGCGTTCCG CAAACCGCGT
GAGACCAACT GGATCATCGG CTGCGTCCTG TTCATCCTGG CCTTCTTCGA GGGCCTGCTG
GGTTACTCCA TCCCGGACGA CGGCCTGTCG GGCACGGGTC TGCGGATCAT GAGCGGTATC
ACCGAGTCGA TCCCGTTGAT CGGCACCTGG GCGCACAACG CGCTGTTCGG CGGCGAGTAC
CCCGGCGAGG TGATCGTCAC CAGGTTCTAC ATCCTGCACG TCCTGCTGGT GCCGGGCATC
CTGTTGGCGC TCATCGGTAT CCACGTCGGT CTGGTCTTCG CGCAGAAGCA CTCGCAGTGG
CCCGGCCCGG GACGCACCGA GCACAACGTG GTCGGTTTCC GGATGTTCCC CAACTACGTG
TCCAAGCAGG GTGGCTTCTT CATGCTGGTC TTCGCGGTCA TCGCGTTGAT GGGCGGCCTG
TTCCAGATCA ACCCGATCTG GCTGTTCGGA CCGTACGAGG CGTCGGTGGT GTCCTCGGCC
AGCCAGCCGG ACTTCTACGT CCTCTTCCTG GAGGGCCTGG TCCGACTGTT CCCCGCCTGG
GAGTTCACGA TCTTCGGGTA CATGGTCCCG GCGGTGTTCT GGCCCGCCGT GATCGGTATG
GGCGTCGCCT TCACGGTGCC GATCTTCTAC CCGTTCATCG AACGCCGCTT CACCAAGGAC
AAGGCGCACC ACAACCTGCT GGAGCGTCCC CGCGACAACC CGACGCGGAC CGCGGTGGGC
GCCATGGTGA CCAGCATCTT CCTGGTCACC ACCATCTCGG GCGCCAACGA CGTCATCGCC
GACCAGTTCA ACATCAGCCT CAACGCGATG ACGTGGGCTG GCCGCATCGG CATCGTCGTG
GTCCCGGTGA TCACGTACTA CGTGACCCAC CGGATCTGCC TCGGCCTGCA ACAGCACGAC
CGCGAGGTCC TGTCGCACGG CATCGAGACC GGCATCCTGC GCCGCGACGC CAACGGCCGC
TTCTACGAGG TCCACCAGCC ACTGGCGGCC CCGGACGAGC ACGGCCACAC CGAGCTGGAG
TACAACGGCT GGGTCGTGCC CAAGAAGATG AACCGGGTCG GCGCGCTGGC CCCGGCCGTC
AAGGGCTTCT TCAAGCCGAT CGAGGAGGAC ACGAACGGCG AGAAACGCGC CATCGAGTCC
TCCGACGACA AGAAGGAGGT CGGCGCCGGA AGGCACTGA
 
Protein sequence
MKRRKFDMKQ LPGKVGNELD DRFKLASPAR KLMTKVFPDH WSFLLGEIAL FSFIVLLLTG 
TFLALFFEPS MVEVKYDGVY TPLKGMEMSK AYESTLHISF EVRGGLVIRQ MHHWAALLFV
AALLVHMGRV FFSGAFRKPR ETNWIIGCVL FILAFFEGLL GYSIPDDGLS GTGLRIMSGI
TESIPLIGTW AHNALFGGEY PGEVIVTRFY ILHVLLVPGI LLALIGIHVG LVFAQKHSQW
PGPGRTEHNV VGFRMFPNYV SKQGGFFMLV FAVIALMGGL FQINPIWLFG PYEASVVSSA
SQPDFYVLFL EGLVRLFPAW EFTIFGYMVP AVFWPAVIGM GVAFTVPIFY PFIERRFTKD
KAHHNLLERP RDNPTRTAVG AMVTSIFLVT TISGANDVIA DQFNISLNAM TWAGRIGIVV
VPVITYYVTH RICLGLQQHD REVLSHGIET GILRRDANGR FYEVHQPLAA PDEHGHTELE
YNGWVVPKKM NRVGALAPAV KGFFKPIEED TNGEKRAIES SDDKKEVGAG RH