| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_4078 |
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| Symbol | |
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| ID | 8885279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 4356898 |
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| End bp | 4358322 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003512823 |
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| Protein GI | 291301545 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.305211 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACA ACCAACTCAC CGGTCAGGGC CGCAACAGGC GTGATGTGCT GCGGCTCGCG
GGCCTCGGGG CGGCCCTCAC CGTCAGCGCG CCGATGCTGC AAGCCTGCGG TTTCGGCGGC
GGCACCCAAA GCGGTGACTC GGCGGCCAAC GACATCACCG GCAGCTTCGA CTGGAAGAAG
TACGACGGCA AGACCGTCAA GCTGCTGATG AACAAACACC CCTACACCGA CGCGCTCAAG
AAACACAAGG GCGAGTTCGA AAAGAAGACC GGCATCACGC TGGAGATCGA CGAGTTCCCC
GAGTCGAACT ACTTCGACAA GGTCACCCTG GAGCTCCAGT CCAAACAGGG CAACTACGAC
GCCTTCATGC TCGGCGCCTA CATGGTGTGG CAGTACGGCC CGCCCGGATA CCTGGAAGAC
CTCGGACCGT GGATGAAGAA CGAGTCGGCC ACCCACGAGG AGTTCGAGAA GGAGGACTTC
TTCCCGAACC TGCTCAAGGC CGGACAGTGG AACTTCACCA ACGGCGACCC GCTCGGCGGC
AAGCAGCAGT GGATGCTGCC GTGGGGCTTC GAGACCAACG TGGTGTGTTA CCGCGAGGAC
GTCTTCAAGA AACTGAAGCT CAAACCGGCC GAGGACTTCG ACGAGTTCAT CGACCTGGCC
AAGACGCTGG ACAAGAAGGC GGGCGACGGC ATGTACGGCG TCGCGGTGCG CGGTTCCAAG
GAATGGGCCA CCATCCACCC CGGCTTCATG ACCATGTACT CCCGGCTCGG TCTCAAGGAC
TTCGACGTCA AGGACGGCAA ACTCGTCCCC ACGATGAACT CCGCCGACGC GGTGGACTTC
ACCGACAAGT GGGCCAAGAT GGTGCGCGAC TCCGGCCCCA AGGGCTGGAC CTCCTACACC
TGGTACCAGG CCTCCAGCGA CCTGGGCGCG GGCAAGGCCG CGATGCTGTT CGACGCCGAC
TCCGCCTCGT ACTTCCAGAA CGAGGGCACC AAGGCCGCCG GAAAGCTCGC CTGGCACCCC
GGACCCAAGG GGCCCAACGG TTCCCTGGAC ACCAACATGT GGATCTGGTC GCTGGCCATG
AACGCCAACT CCAAGAACAA GGAAGCCGCG TGGTGGTTCC TGCAGTGGGC CACGTCCAAG
GAGCACCTGA AGTACGCCGC CACCAAGGGC CAGCACATCG ACACGGTTCG CCAGTCGATC
GCCGAATCGT CGGAGTACAA GGACAAGTTC GCCGACTACA CCGGCTTCCT CGACACCTTC
GAAAAGGTCA TCGACGACAC CAAGATCCAG TTCACGCCGC AGAAGAACTT CTTCGACGCC
ACCACCTCGT GGGCCGAGGC GCTGCAGACG ATCTACGGCG GCGAGGACGC CAAGTCCACA
CTCGACGACC TCGCGTCCAA CCTTGAGTCG AGGGTCAACG ACTGA
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| Protein sequence | MNDNQLTGQG RNRRDVLRLA GLGAALTVSA PMLQACGFGG GTQSGDSAAN DITGSFDWKK
YDGKTVKLLM NKHPYTDALK KHKGEFEKKT GITLEIDEFP ESNYFDKVTL ELQSKQGNYD
AFMLGAYMVW QYGPPGYLED LGPWMKNESA THEEFEKEDF FPNLLKAGQW NFTNGDPLGG
KQQWMLPWGF ETNVVCYRED VFKKLKLKPA EDFDEFIDLA KTLDKKAGDG MYGVAVRGSK
EWATIHPGFM TMYSRLGLKD FDVKDGKLVP TMNSADAVDF TDKWAKMVRD SGPKGWTSYT
WYQASSDLGA GKAAMLFDAD SASYFQNEGT KAAGKLAWHP GPKGPNGSLD TNMWIWSLAM
NANSKNKEAA WWFLQWATSK EHLKYAATKG QHIDTVRQSI AESSEYKDKF ADYTGFLDTF
EKVIDDTKIQ FTPQKNFFDA TTSWAEALQT IYGGEDAKST LDDLASNLES RVND
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