Gene Snas_4047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4047 
Symbol 
ID8885248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4316474 
End bp4317244 
Gene Length771 bp 
Protein Length256 aa 
Translation table11 
GC content69% 
IMG OID 
ProductNAD(P)H dehydrogenase (quinone) 
Protein accessionYP_003512792 
Protein GI291301514 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.984998 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.00915897 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAACAC TGTGGATCTA CGCCCACCCC GAACCCCGTT CCCTCAACGG ATCGCTGCGC 
GACGAGGGGG TGCGGACGCT GCGCGGGCTG GGGCACGAGG TGCGTGAGTC CGACCTGTAC
GCGATGAACT GGCGGCCGGT GGTGGCCGAG GATGACTTCC CCGGACGCCA GGCTGGCCGA
CTGTGGGTGG GCGACGCGCA GCAGACCGCC TACGCCGAGG GCACGCTCAG CCCCGACATC
CTCGCCGAGC AGGAGAAGGT GCTCTGGGCC GACACCATCG TGATCCAGTT CCCGTTGTGG
TGGTTCGGGA TGCCTGCCAT CCTCAAGGGA TGGTTCGACC GGGTGTTCCT ACAGGGCTTC
GCCTTCGGCC TGGCGAACCC CGCCACCGGC AGGCAACGGC GCTACGGCGA CAACGCCCTG
TCGGGCAAGC GGGCGCTTGT CGTGACGACC TTCGGCGCCC GTGAGTCCAG TATGGGTCCG
CGCGGCATCC ACGGCGCCAT CGACGATCTG CTGTTCCCGC TCCAGCACGG GATCCTGTGG
TACGCGGGCA TCGCCGCGCT GCCACCGTTG GCGATCGACG GGGCGAACCG GATGTCCGAC
GACGAGTACC AGCTGGCCGC CAAGCGGCTG CGCGAACGGC TGCGGAACCT GCCGGAGCAG
ACCGCGGTGC CGTTCCGCTA CCAGGATCAC GGCGACTACG ACGCCGACCT GGTGCTGCGC
CCGGAGCTTG CCCCGGGCGA GACCGGATTG AGCATCCACA CCAGCCGATA A
 
Protein sequence
MKTLWIYAHP EPRSLNGSLR DEGVRTLRGL GHEVRESDLY AMNWRPVVAE DDFPGRQAGR 
LWVGDAQQTA YAEGTLSPDI LAEQEKVLWA DTIVIQFPLW WFGMPAILKG WFDRVFLQGF
AFGLANPATG RQRRYGDNAL SGKRALVVTT FGARESSMGP RGIHGAIDDL LFPLQHGILW
YAGIAALPPL AIDGANRMSD DEYQLAAKRL RERLRNLPEQ TAVPFRYQDH GDYDADLVLR
PELAPGETGL SIHTSR