Gene Snas_4041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_4041 
Symbol 
ID8885242 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4310879 
End bp4311325 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content71% 
IMG OID 
Producttranscriptional regulator, MarR family 
Protein accessionYP_003512786 
Protein GI291301508 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.00474505 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
GTGACACAAG AAGAACAGGA CCTGTTGAGC GGTGCGGCCT TGACCTCGTT CCGGCTCAGT 
GGCCAGTTTC TCGCGGTGGC CGAGAAACTG GCCCGCCCGG TGGGGCTGAC GGCGGCCTGG
TGGCAGGTCC TGGGCGCGGT GCTGCGGGAA CCGCTGCCGG TGGCCGGGAT CGCCCGCGCC
ATGGGCATCA CCCGCCAGAG CGTGCAGCGC ATCGCCGACC GGCTGGTGAA CGACGGCCTG
GCCGAGTACC TCCCCAACCC GGCCCACCGC CGCGCCCAGC TGGTGCGCCC CACCCAGGCC
GGTTACGACG CCGTCCGAAA GATCGACCCC GCCCACGCCG CCTTCGCTCA CCGCCTCACC
CAGGCGATGG GGGCCGAGGA ACTGGAAGCG GCGCTCAAGG CGATGACCAC CCTGTCGCGT
GTGCTGGACG ACCTCGACGC CGAGTAA
 
Protein sequence
MTQEEQDLLS GAALTSFRLS GQFLAVAEKL ARPVGLTAAW WQVLGAVLRE PLPVAGIARA 
MGITRQSVQR IADRLVNDGL AEYLPNPAHR RAQLVRPTQA GYDAVRKIDP AHAAFAHRLT
QAMGAEELEA ALKAMTTLSR VLDDLDAE