Gene Snas_3988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3988 
Symbol 
ID8885189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4257085 
End bp4257849 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content68% 
IMG OID 
Productimidazoleglycerol phosphate synthase cyclase subunit 
Protein accessionYP_003512733 
Protein GI291301455 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.485647 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTTGG CCGTTCGTGT CATTCCATGC CTCGACGTCG ACGCTGGCCG CGTCGTCAAG 
GGGGTCAAGT TCAAGGAGTT GCGCGACGCG GGGGATCCGG TGGAACTGGC CGCCGCGTAT
GGTGCGGCCG GGGCCGATGA GCTGACGTTT CTGGATGTCA CCGCGTCGGT TGACGACCGG
GCCACCATGA TCGATGTCGT GCGCCGCACC GCTGAGACCG TGTTCATTCC GCTGACCGTG
GGTGGGGGAG TGCGGTCGGT GGAGGACGTG GACGCGTTGC TGCGGGCCGG GGCGGACAAG
GTTGGAGTCA ACACCGCCGC GATCAACCGG CCGGAGCTCA TCGCTGAGAT CGCGAAGCGG
TTCGGGAACC AGGTGCTGGT GTTGTCGCTG GACGTCCGCC ACACCGGGGA GACCGCGAGC
GGCTGGGAGG TCACGACGCA CGGCGGCCGT CAGGGGACCG GGCTCGACGC GGTCGAGTGG
GCGAAACGGG GCGCCGAGCT GGGGGCGGGG GAGTTGCTGG TCAACTCGAT GGACGCCGAC
GGTACGAAGG ACGGGTTCGA TCTGCCGTTG ATACGCGCTG TCCGTGCCGC CGTTGACATC
CCGGTGATCG CTTCGGGTGG GGCGGGGGAG CTGGACCATT TCGCTCCGGC GGTGGAGGCC
GGGGCCGACG CGGTGTTGGC CGCGAGTGTG TTCCACTTCG GGCAGTTGAG TATTGGTGAG
GTCAAGGACG CGCTGGCCGC GTCCGGGGCC ACCGTGCGGC GGTAG
 
Protein sequence
MSLAVRVIPC LDVDAGRVVK GVKFKELRDA GDPVELAAAY GAAGADELTF LDVTASVDDR 
ATMIDVVRRT AETVFIPLTV GGGVRSVEDV DALLRAGADK VGVNTAAINR PELIAEIAKR
FGNQVLVLSL DVRHTGETAS GWEVTTHGGR QGTGLDAVEW AKRGAELGAG ELLVNSMDAD
GTKDGFDLPL IRAVRAAVDI PVIASGGAGE LDHFAPAVEA GADAVLAASV FHFGQLSIGE
VKDALAASGA TVRR