Gene Snas_3950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3950 
Symbol 
ID8885150 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4214609 
End bp4216186 
Gene Length1578 bp 
Protein Length525 aa 
Translation table11 
GC content70% 
IMG OID 
ProductD-Lysine 56-aminomutase subunit alpha 
Protein accessionYP_003512695 
Protein GI291301417 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAAC TGGCGCGGCT GCCGCTCGAC GACGGCACCA TCGACCGGGC TCGCAAACTC 
GCGCGGCGCG CGGGCCAGCC GGTCGTGGAC ATGGCCAAGA GCCACACCAC CGTCGCCGTG
GAGCGCACGG TGCTGCGGCT GGCGGGCCTG ACCGGCGCCG ACGGCGACGG CATCCCGTGG
GTGAACCGGC TGGCCGACGC CGTCCGCTCC GATGTGGGCA TCGAGCACGG CGTCGCGCTG
CCGGTGTTCC ACGCGCTGGT GTCCGAGGGC CACCACGACC TGACCATGTT GGCGCACAAG
GCCGCCGCCG GTTCGCTGCA CTTCTCCATC CCCACCGGCA AGGACGCCGA AGCCGCCAAG
GAGGCCGCCC GCATCGCCGT GTCGGGCGGC ATCGCCCGCA TGGACGCCGC CCGCGCCCAG
CGCGACCAGC TCATCGACGA GGTCGGCAAC CCCAAGCAGC GTCCCTGGAT CTACCTGATC
GTGGCCACCG GCGACATCTA CGAGGACATC CCGCAGGCAC AGGCCGCCGC CCGGGCCGGA
GCCGACGTCA TCGCCGTCAT CCGCTCCACC GGACAGTCCC TGTTGGACTA CGTCCCCGAG
GGCGCCACCC GCGAGGGCTT CGCCGGAACC TACGCCACCG GCGAGAACTT CCGGCTGATG
CGCGCCGCCC TGGACGAGAC CAGCCGGGAA CTGGGCCGCT ACATCCGGCT GTGCAACTAC
GCGTCCGGCC TGTGCATGCC CGAGATCGCG GCGCTGGCGG GCATGCACCG CTTGGACATG
ATGCTCAACG ACTGCATGTA CGGCATCCTG TTCCGCGACA TCAACCCGAT CCGCACCTTC
GTGGACCAGC GGCTGTCGCG CCAGATCCAC GCCCGCGCCG GGATCATCAT CAACACCGGC
GAGGACAACT ACCTCACCAC CGCCGACGCC GTGGAGGCCG CGCACACCGT CACGGTCTCG
CAGCTGCTCA ACGAGTACTT CGCCCACGAG GCGGGACTGC CGGACGAACT GCTGGGCCTG
GGCCACGCCT TCGAGATCAA CCCGGACCTG AAGGACTCGT TCCGGATGGA ACTGGCCCAC
GCGATGCTGG CGCGGCAGCT GTTCCCCGAC GCGCCGCTGA AGTGGATGCC GCCCACCCGG
CACATGACCG GCGACGTCTT CAAGGGCAAC CTGCTGGACG GCTTCTTCAA CCTCGCCGGG
GCCATGACCG GGCAGGGCAT CCTGCTGGTG GGCATGATGA CCGAGGCCGT GGTGACCCCG
TGGCTGTCGG ACCGCGACAT CGCGCTGCAG AACGTCCGCT ACGTCCTCAA CGCCTGCGGC
GGCCTCGTCG AGGACTTCCA TCCACCGGCC GACGGCTTCA TCGCCAACCG GGCCAGGTTC
GTGCTGGACG AGGCCGTCGA CCTGCTGGAC AAGATCGTCG ACGACGGCCT GCTCAACGCC
ATCGCCGACG GCACCTTCGG CATCATGAAA CGCCCCGCCG ACGCCGGTCG CGGCCTCGAC
GGCGTCGAGA AGCACGCCGA GGACTACTAC AACCCGGCCA CCGAACTGCT GGAAGCCGGA
CAGAAGGAGG CAGCGTGA
 
Protein sequence
MNQLARLPLD DGTIDRARKL ARRAGQPVVD MAKSHTTVAV ERTVLRLAGL TGADGDGIPW 
VNRLADAVRS DVGIEHGVAL PVFHALVSEG HHDLTMLAHK AAAGSLHFSI PTGKDAEAAK
EAARIAVSGG IARMDAARAQ RDQLIDEVGN PKQRPWIYLI VATGDIYEDI PQAQAAARAG
ADVIAVIRST GQSLLDYVPE GATREGFAGT YATGENFRLM RAALDETSRE LGRYIRLCNY
ASGLCMPEIA ALAGMHRLDM MLNDCMYGIL FRDINPIRTF VDQRLSRQIH ARAGIIINTG
EDNYLTTADA VEAAHTVTVS QLLNEYFAHE AGLPDELLGL GHAFEINPDL KDSFRMELAH
AMLARQLFPD APLKWMPPTR HMTGDVFKGN LLDGFFNLAG AMTGQGILLV GMMTEAVVTP
WLSDRDIALQ NVRYVLNACG GLVEDFHPPA DGFIANRARF VLDEAVDLLD KIVDDGLLNA
IADGTFGIMK RPADAGRGLD GVEKHAEDYY NPATELLEAG QKEAA