| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3889 |
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| Symbol | |
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| ID | 8885089 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 4155759 |
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| End bp | 4156658 |
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| Gene Length | 900 bp |
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| Protein Length | 299 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | transcriptional regulator, TetR family |
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| Protein accession | YP_003512637 |
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| Protein GI | 291301359 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.110513 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.292317 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGCAG CCACCCCGCG CGCCGACGCC CGCCGCAACC GTGCCAACGT GCTGGCCGCC
GCCGAGGACC TGTTCGCCAG CCAGGGCCTT TCGGTCCCGC TCGACGAGAT CGCCCGGGCC
GCCGGGGTCG GCGCCGGTAC CGTCTACCGC CACTTCCCCA CCAAGGACGC CCTGTTCGAG
GCGGTCATGG CCCAGCGGAT CGAGCAGCTG GGAGCCAGCG CCGTGTCAGC CCTGGAGTGC
GAGGACGCCG AGTCGGCCTT CTACGAGTTC CTCGCCCACG CCATGGAACA GGCCCGGCTC
AACCGGGCAC TGTGCGACGC CATGGCCCGC CACGACGAGT GGCGGGCGGC GGCCGAGACC
ACCGGCCCGC ACTGCCGGTT CACCGACGCC TTCGAGCGGC TGCTGCGCCG GGCCCAGACG
GCCGGAGCGG TACGCACCGA TGTGGACGTC GACGACCTCG CGGCCCTGAT CCCGGGGTAC
GTGGCCATGG TCGCCCACCG CGAGGACGAG GCGGGCGCGC GACGCATCAG GATGCTGCTG
TGGGACGGGC TGCGGCCGCC CGGAACGAAA CGAAACCCGG CGCCTTTCCG TAACGAAACT
CCGGTGTCGA TCCCCGACCG TAACGAAACT CGGCCGCGTT GCGAGACCTG CGACAGCCCG
ATCCACACCG CGAACACCGG ACGTCCGGCG AGGTATTGCA GTCCGGCCTG TCGCCAGAAG
GCGCACCGGC GGCGCGCGAC GGCCCGCACC CGGCAACCGG TTTCGTTACG GACCCGAAGT
CTCCATGTAG GACAGTCTGA GTTCGCCTTC GCCTTCCGGT TCACGGTCGC CGACGGTCGC
ATCACCCACT ACATCCCGCA CGAGGACTCA CTCGCCCTGT CGCGCGCCTA CGCGGATTGA
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| Protein sequence | MTAATPRADA RRNRANVLAA AEDLFASQGL SVPLDEIARA AGVGAGTVYR HFPTKDALFE
AVMAQRIEQL GASAVSALEC EDAESAFYEF LAHAMEQARL NRALCDAMAR HDEWRAAAET
TGPHCRFTDA FERLLRRAQT AGAVRTDVDV DDLAALIPGY VAMVAHREDE AGARRIRMLL
WDGLRPPGTK RNPAPFRNET PVSIPDRNET RPRCETCDSP IHTANTGRPA RYCSPACRQK
AHRRRATART RQPVSLRTRS LHVGQSEFAF AFRFTVADGR ITHYIPHEDS LALSRAYAD
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