Gene Snas_3855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3855 
Symbol 
ID8885055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4114929 
End bp4115447 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content67% 
IMG OID 
ProductRNA polymerase sigma-24 subunit, ECF subfamily 
Protein accessionYP_003512604 
Protein GI291301326 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGCCG AGCAGGAAGC CGAGTTTCGC GAATACGTCG CCGCCCGGGC CGGGCAGTTG 
CGTCGGTGCG CCTATCTGGT GTGCGGCGAC TGGCATCGCG CCGAGGACGC CGTCCAAATC
GCCTTCGTGA AGCTTTACGG CGCCTGGAAT CGGGCGCGGC GATCCGGGCT GGACGCCTAT
GCCCGGCGCA TCGTCCTCAA CTCGGTCATC GACGACCACC GGCGGGCGTG GTTCCGTCGG
GAACGGTCGA GCGAACGGCT TCCCGAGCGG CCGCTGGGCG ACCACAGCCA GGCCAGCGCC
GACAGACTCA CGATCATGAA TGCCCTCGCC CTGCTGCCGG TGCGGCAGCG GGCGGTCATC
GTCCTGCGGT ATTGGGACGA CCAGCCGGTC GAGCAGACCG CACTCATCAT GCGCTGCTCG
ACCGGCACCG TCAAAAGCCA GACCGCGCGA GGCTTGCGAA CACTGCGCGG CCTGCTGACG
GAATCGATCC ACGAACGAAT CGAGGGAATT ACATCATGA
 
Protein sequence
MRAEQEAEFR EYVAARAGQL RRCAYLVCGD WHRAEDAVQI AFVKLYGAWN RARRSGLDAY 
ARRIVLNSVI DDHRRAWFRR ERSSERLPER PLGDHSQASA DRLTIMNALA LLPVRQRAVI
VLRYWDDQPV EQTALIMRCS TGTVKSQTAR GLRTLRGLLT ESIHERIEGI TS