Gene Snas_3830 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_3830 
Symbol 
ID8885030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp4087230 
End bp4088471 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content70% 
IMG OID 
Productdrug resistance transporter, Bcr/CflA subfamily 
Protein accessionYP_003512579 
Protein GI291301301 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.423466 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTGCCG CCGAGGCCGC CCCCCAGTCC GCCGGTCATC CGCGCCGCTT CGTCGCGCTG 
CTCGTACTGA CCCTCGGAGT CATCACGGCG ACCGGTCCAC TCGCGACAGA CCTGTACCTG
CCCGCGTTCC CCGAGATCGC CAAGGACCTC GACGCGCCGC AGTCGCACAT TCAGCTGACG
CTGACCTCGG CCATGTTCGG TCTGGCCGTC GGACAGATGA TCATCGGCCC GATGAGCGAC
GCCTTCGGCC GCCGCAGGCC GCTGCTCATC GGCACCGCGA TCTTCACCGT GGCGTCGTTC
CTGTGCGTGT TCGTGCCCTC GGCCGGGGTG TTCATCGCGC TGCGGTTCGT GCAGGGCGCG
GCCGGGGCCG CCGGCGCCGT CATCGCCCGC GCGATAGTGC GCGACCACTT CTCCGGCGAC
GCGATCACCA AGTTCTTCTC CCGGCTGGTG CTGGTGACCA TGCTGGCGCC GATGCTGGGC
CCGATCCTGG GCGCCCAGCT GCTGCGGGTC GGGCCCTGGC AGGTCGGGTT CATCGTGCTG
ACCGTCGTGT CGATCATCGG GATGGTGCTG GTGTACTTCG CGCTGCCGGA GAGCCTGCCG
GCCTCGCAGC GCCGCGCCAC CACCCCGGCG GCGCTGTTGA ACGTGGTGCG GCGGCTGATC
GCCGACCCCC GGTTCATCGG ACCCGCTCTG ACGCTGGCGC TGGTGTTCGG AGGACTGTTC
ACCTACATCT CGTCGTTCTC GTTCGTGGCG CAGGAACAGC TGGGCGCCAC CGCGCAGCAG
TACAGCTACG TCTTCGGCAT CAACACGCTG GCGATGCTGG GCGGCACCCA GATCAACGGG
TTCCTCATCG GCCGGGTCGG CACCCGGTCG CGGCTGATCG CCGGGCTCGC GGGTTCGTGC
GTCGGGGTGC TGGCACTGGC CATCCTGGAC GTGTCCGGGG CGACGGACCT GGTGTCGCTG
ACGATCGCGC TGGCGATCCT GATGCTCAGC CTCGGCATGG TGTTCCCCAA CTGCACCAGC
CTGGCGCTGG CCAGCCAGCC CGCCTCGGTG GCCGGTACCG GCTCGGCCCT GATCGGGACG
CTCCAGTTCG GGCTCGGCGG CGCGATCCCG GCAGCGGCGG CCTGGACCCC GGACGGCCGG
GTGTCGCTGG CGAGCATGGT GATCGTGATG CTGTCCGCGA TCCTTGTCGC GGTACCGGTT
TTCGCGCTAT TCGGTGTACG AGCGACCCGC TACGCGGACT GA
 
Protein sequence
MSAAEAAPQS AGHPRRFVAL LVLTLGVITA TGPLATDLYL PAFPEIAKDL DAPQSHIQLT 
LTSAMFGLAV GQMIIGPMSD AFGRRRPLLI GTAIFTVASF LCVFVPSAGV FIALRFVQGA
AGAAGAVIAR AIVRDHFSGD AITKFFSRLV LVTMLAPMLG PILGAQLLRV GPWQVGFIVL
TVVSIIGMVL VYFALPESLP ASQRRATTPA ALLNVVRRLI ADPRFIGPAL TLALVFGGLF
TYISSFSFVA QEQLGATAQQ YSYVFGINTL AMLGGTQING FLIGRVGTRS RLIAGLAGSC
VGVLALAILD VSGATDLVSL TIALAILMLS LGMVFPNCTS LALASQPASV AGTGSALIGT
LQFGLGGAIP AAAAWTPDGR VSLASMVIVM LSAILVAVPV FALFGVRATR YAD