| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_3801 |
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| Symbol | |
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| ID | 8885001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | - |
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| Start bp | 4052742 |
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| End bp | 4055723 |
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| Gene Length | 2982 bp |
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| Protein Length | 993 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | |
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| Product | transcriptional regulator, SARP family |
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| Protein accession | YP_003512550 |
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| Protein GI | 291301272 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000525265 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCTCCCG TTGGTGACTC ACCGCTCATT AGGCTGCTCG GAGAGGTATC GGTTCTCGTC
CAGGGAAAAC CGGTCTCGGC GGGTACGCCG AAGCAGGCGT GTGTGTTGGC GTGTCTGGCC
TGGACGCCGG GTACTCCGGT GGACACTGAC ACGATCATCG AGCGGGTCTG GGACGGTGAC
GCTCCGACCA ATCCGCGGAA CACGTTGTCG CCGTATGTGA CCCGGTTGCG TTCGCTGCTG
TCGGACACCG GTGCGACCAT CACCGGTAAG AGCGGCACCT ACACCCTCAA CATCGCCGAC
ACCGACGTCG ACGTCCACGC CATGCGCGCC TGGGCCACGC AGGCCCGGGG ACTGGCGGCC
ACCGACCCGG CCCGCGCGGT CGCGCTGCTG CGGGCGGCGC TGGGCCTGTG GCGGGGACGA
CCGCTGTCGC GCGTCGACTG CCGCTGGGCG GACTCGATCT CCGTGGCCGT GGAACCCGAG
CACGTCGAGG TGTGGACGCA GCTGTTCGAG GTGGAACTGT CCCGCGACAA CCACGCCCGC
GTCATCGGCG AACTGTCCGA AGTGGTGGCC GACAATCCCG TCAACGAGAA CCTCATCGGG
CAGTACCTGG TGGCGCTGTA CCGCTGCGGC CGTGGCATCG AGGCGCTGGA GTGCTACCGG
CAGGCCCGGC AGCGGCTGCG GGACGAGTTC GGCGTGGACC CCTCGCCCAG GCTCGCCGAC
ATCCAGCGCC GCATCCTCGC CGACGACCGG GACCTGCTGT CGGCCCGCAC CGACGTGGCC
GCCGAGGTCG CGGTGCCCCG GCAGCTGCCC GCCGCCCCGG CCGGGATCAT CGGACGCGAC
ACACTGATCA ACGCCGCCGA CGCCGCGGTG GCCCGTGACC ACGACACCGT CGCCTTCGTC
GGACCCGGCG GCGCCGGGAA GACCGCGCTA GCGCTGACCT GGGCGCACAA ACTCTCCGCC
CGCTTCACCG ACGGCCAGCT GTTCGCCGAC CTGCGCGGCT TCTCCGGCAC CGAACCGGCG
CCACCGGCCC GGGTGCTGAC GGGTTTCCTT CGGGCTTTGG GGGTTCCGGC CTCCCGGCTG
CCCGCCGGGG AGAGCGAACT GTCGGCGCTG TTCCGCGCCA CCGTCGCCGG GCGCCGGATC
CTCATCGTCT TGGACAACGC CGTCGGGCCG AGACAGCTGC GGCCGCTGCT GCCCGGCGAC
GACGGCTGCC TGACCGTGGC CACCAGCCGC GACAACCTCA GCGGCCTTGA CCGCGTCCAC
GCCATCACCG TCGCCGAACT GTCCAGCGCC GACTCGCAGC GGGTGCTGGC CGAGACGCTG
GGCGCCCGCC CCGGACCGGT CGCCGCCACC CTGATCGCGC GGCTCGCCGA GCAGTGCGGG
AACCTGCCGC TGGCGTTGCG GCTGGCCGCC AGCCAGCTGT CGGGCGGCTC GGACCACGAA
CTGTCCGAAC TGGTCGACGA CCTGGACTCC GGCGATCGGC TCGCGACACT GTCCTATCCG
GAGGACTCGC CCGGCGGTGT CGCCGCCGCC ATCGAGACGT CCTACAAGGT CCTGGCGCCT
GGGCCCCGGC ACCTGTTCCG GCTGCTGGGG CTGCACCCTT CGGGCACCGC CGACGTCGAA
GCGCTGGCGG CCATGGCCGA CGCCGACCTG GCCGAGACCG AACGGATCCT GTCCACACTC
GCCGCCGCAC ACCTGGTGGA GCCCACTGGG GACGGCCGCT GGGGCATGCA CGACCTGGTC
GCCGAGTACG CCTCCCGGCT CGACGCCCCC GACCGGGAGG CCGCGCTGAA ACGCGGCCTC
GACTGGTACC TGGCCGCGGT GCTGGCCGCC GAGAACGCCT CCGGCGGTGG CCAGGTCGCC
ACCAGGACAC CGGAGGTCGC GGCACCGGTA CCGACCTTCG CCGACCCCGA CGCGGCCCTG
GCCTGGCTGG ACTCCCGCTA CCCGACCCTG GTGTCGGCGG TGTCCTTCGC CGACGACGCC
GGGTTCCCCG AACACGCGAT CGGCATCGCC GGGTCGCTCA CCGACTACTG CTACAACGGC
GGCCGCGTCG AGGACTGGGT GCACCTGCTC CGGGTGGCGC TGTCGGCCGC GCGGCGGCTG
GGCGACCCGG TCGTCATCAA CCGCATGCAC GTGCTGCTGG GCAGCGGATA CCGGCGGCTG
AACCGCTCCG ACATCGCCAT CGACCACTAT CGACAGGCGA TGGACGCGGC CCGGCAGGCC
CGGGACACCT ACCGGCAGGC CGTCACCGGT TTCGCCCGCG CCTACGTCCA CCGCGACCAC
GGCGAGTACG AGCAGGCCCG CATCGCCTGC GAGGCCGCGA TACCGCACCT GCGCGAGCAC
GGCGACGTCC GCACCGAGGC CAACCTGTTC ACCGACCTGG CGCTGCTGGC GATCCTGCGC
GGCGACTACC CCGAGGCCAC CCGCCTCAAC GACACCGCCC GCCGACTCGC CGAGGAGTAC
CGGCTGCGTT CGGTCATGCC CTACGTCATC GAGTACTCCG GCCGGATCCT CTACCGGCAG
GGCCGTCTGG ACGAGGCCGC GGCCGCCTTC GCGTCGGTGC TGTCCGGGTT CGGCGAGGTG
GGGGAGTACG GCGCGGCGCT GATCGCCAGT CAGCTGGCCG TGGTTCAGTC CCGGCTCGGC
CACGTCGACG CCGCCCGCGC CCGGCACCTG ACGGCACTGT CGGCCACCGC CGATCCGTCC
ACACCGGACG ACGACCGGGC CGCGGTGCTG AGCGACTCGG GACTGTCGTT CCGGCTCGCG
GGCCAGCCCG AACAAGCCCT GGAACACCAC CGCGAGGCGC TGTTCGTCGC CGAACGCGGC
GGCATCCCGT ACCAGCAGGC TCGCGCCCAC CATGGACTGT GTCTGGCGTT TCGGGCGCTG
TCCGACACCG ACCGGGCCGA GGAGCACTGG CGCGAGGCCC TGGACATCCA CACCCGGCTG
GGCACCGCCG AGGCCACCGA ACCCGGCCAC CCGATGTACT GA
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| Protein sequence | MPPVGDSPLI RLLGEVSVLV QGKPVSAGTP KQACVLACLA WTPGTPVDTD TIIERVWDGD
APTNPRNTLS PYVTRLRSLL SDTGATITGK SGTYTLNIAD TDVDVHAMRA WATQARGLAA
TDPARAVALL RAALGLWRGR PLSRVDCRWA DSISVAVEPE HVEVWTQLFE VELSRDNHAR
VIGELSEVVA DNPVNENLIG QYLVALYRCG RGIEALECYR QARQRLRDEF GVDPSPRLAD
IQRRILADDR DLLSARTDVA AEVAVPRQLP AAPAGIIGRD TLINAADAAV ARDHDTVAFV
GPGGAGKTAL ALTWAHKLSA RFTDGQLFAD LRGFSGTEPA PPARVLTGFL RALGVPASRL
PAGESELSAL FRATVAGRRI LIVLDNAVGP RQLRPLLPGD DGCLTVATSR DNLSGLDRVH
AITVAELSSA DSQRVLAETL GARPGPVAAT LIARLAEQCG NLPLALRLAA SQLSGGSDHE
LSELVDDLDS GDRLATLSYP EDSPGGVAAA IETSYKVLAP GPRHLFRLLG LHPSGTADVE
ALAAMADADL AETERILSTL AAAHLVEPTG DGRWGMHDLV AEYASRLDAP DREAALKRGL
DWYLAAVLAA ENASGGGQVA TRTPEVAAPV PTFADPDAAL AWLDSRYPTL VSAVSFADDA
GFPEHAIGIA GSLTDYCYNG GRVEDWVHLL RVALSAARRL GDPVVINRMH VLLGSGYRRL
NRSDIAIDHY RQAMDAARQA RDTYRQAVTG FARAYVHRDH GEYEQARIAC EAAIPHLREH
GDVRTEANLF TDLALLAILR GDYPEATRLN DTARRLAEEY RLRSVMPYVI EYSGRILYRQ
GRLDEAAAAF ASVLSGFGEV GEYGAALIAS QLAVVQSRLG HVDAARARHL TALSATADPS
TPDDDRAAVL SDSGLSFRLA GQPEQALEHH REALFVAERG GIPYQQARAH HGLCLAFRAL
SDTDRAEEHW REALDIHTRL GTAEATEPGH PMY
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